Gene Pden_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0308 
Symbol 
ID4579704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp288547 
End bp289488 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content68% 
IMG OID639767623 
Producthypothetical protein 
Protein accessionYP_914118 
Protein GI119383062 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.897477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAT TCGTTCTCGC CAGCCTGTTC GCGGCCGCCA CGGCCCTGCC GGCCATGGCC 
GATTACACCA TCATCGCCCC GGCCAATCCC GGCGGCGGCT GGGACCAGAC CGCGCGCACC
ATGCAGGCCG TGATGCAAGA GGAAGGCATC TCGAAATCGG TGCAGGTCCA GAACGTGCCC
GGCGCCGGCG GCACCATCGG GCTGGCGCAG TTCGCCAGCC AGAACAAGGG CAATCCCGAC
GCGCTGATCG TCGGCGGCTA TGTCATGGTC GGCGCCATCC TGACCAACAA CTCGCCCGTC
TCGCTCAAGG ACGTGACGCC CATCGCGCGG CTGACCGGCG AATACGAGGC GATCGTGGTC
CCCGCCGCCT CGCCCATCCA GGACGTCGCC GGGCTGATCG AGGCGCTGAA GGCCGATCCG
GGCGCGGTCA GCTGGGCCGG CGGCTCGGCC GGCGGCACCG ACCATATCGC CGTGGGCCTG
ATCGCCAAGG CGGCGGGCGT CGATCCGACC AAGATCAACT ACATCGCCTA TTCCGGCGGC
GGCGAGGCGC TGGCGGCGAT CCTGGGCAAC CAGGTGACGG CCGGCATTTC CTCGCTGGGC
GAGTTTGAGG CCCAGATCCA GGCCGGCACC TTGCGCCTCC TGGCCGTGAC CGCGCCCGAG
CGGCTGGAGG GCGTCGATGC GCCGACCCTG CAAGAGGCCG GGCTGGACGT GGTGCTGGAG
AACTGGCGCA TGGTCGCCGC GGCGCCGGGC CTGTCGGACG AGCAGAAGGC CAAGGTCACC
GCCGATATCG AAAAGATGGC CAAGTCGGAG AACTGGCAAA AGCAGCTCTC GGACAAGGGC
TGGATGGACA CCTACCTCGC CGGTCCCGAA TTCGAGGCCC AGCTTGAACA GGACGTGACC
TCGACCGAGG CGATCCTCAA GGACATCGGT CTGGTGAAAT GA
 
Protein sequence
MKQFVLASLF AAATALPAMA DYTIIAPANP GGGWDQTART MQAVMQEEGI SKSVQVQNVP 
GAGGTIGLAQ FASQNKGNPD ALIVGGYVMV GAILTNNSPV SLKDVTPIAR LTGEYEAIVV
PAASPIQDVA GLIEALKADP GAVSWAGGSA GGTDHIAVGL IAKAAGVDPT KINYIAYSGG
GEALAAILGN QVTAGISSLG EFEAQIQAGT LRLLAVTAPE RLEGVDAPTL QEAGLDVVLE
NWRMVAAAPG LSDEQKAKVT ADIEKMAKSE NWQKQLSDKG WMDTYLAGPE FEAQLEQDVT
STEAILKDIG LVK