Gene Pden_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0306 
Symbol 
ID4579702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp286535 
End bp288052 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content68% 
IMG OID639767621 
Producthypothetical protein 
Protein accessionYP_914116 
Protein GI119383060 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAT TCGAATTCCT GATGCAGGGG CTTGGCACCG CCGCCGACCC GATGATGCTG 
CTTTACGCGC TGATCGGCGT GACGCTGGGC ACCGCCGTCG GCGTCCTGCC CGGCATCGGC
CCGGCGCTGA CCGTGGCGCT TTTGCTGCCC GTCACCTACC GGCTGGACCC GGCCGGCTCG
CTCATCATGT TCGCCGGCAT CTATTACGGC GGCATGTATG GCGGCTCGAC CACCTCGATC
CTGCTGAACA CGCCGGGCGA AAGCGCCTCG ATCATCACCG CGCTGGAAGG CAACAAGATG
GCCCGCAAGG GCCGCGGCGG CCCCGCGCTG GCCACGGCCG CCATCGGCTC GTTCATCGCC
GGCCTGATCG CGACGCTGCT TCTGGCCTTC CTCGCGCCCA GCATCGTCAA GCTGGCGCTG
GTCTTCGGCC CGCGCGAATA TTTCGCGCTG ATGGTGCTGG CCTTCGTCAC CGTCTCGGCC
GCGTTCGGCG ATTCGGCCCT GCGCGGGCTG ACCTCGCTGT TCCTGGGCCT GGCGCTGGCC
TGCGTCGGCA TCGACCAGCT CACCGGGCAG GCGCGGTTGT CCTTCGGGGT GCCCGAGCTG
CTGGACGGGA TCGAGGTCAC CACCATGGCC GTCGCAATGT TCGCCGTGGG CGAGGCGCTG
TTCATCGCCG GCCAGCGCGT GCAGGTCGAC GACGAGGTGA CGGCCGTCAA GGGCTCGATC
TGGATGAACC GCCGCGACTG GGCGCGGTCG TGGAAGCCCT GGCTGCGCGG CACGTTCATC
GGCTTTCCCA TCGGCGCCAT GCCGGCGGGC GGGGCCGAGA TCGGCACCTT CCTGTCCTAT
GCGACCGAAA AGAAGCTGAC CAAGCACCCC GAGGAATTCG GCAACGGCGC CATCGAAGGC
GTCGCCGGTC CCGAGGCCGC GAACAATGCC AGTGCCGCCG GCACGCTGGT GCCCCTGCTG
ACGCTGGGCC TGCCGACCTC GGCCACGGCG GCGATCATGC TGGCCGGTTT CCAGCAGTTC
GGGCTGCAAC CGGGCCCGCT GCTTTTCGCC ACCAACCCGA CGCTGGTCTG GGGGCTGATC
GCCTCGCTGC TGATCGCGAA CGCGATGCTG CTGGTGCTGA ACCTGCCGAT GATCGGGCTG
TGGGTAAAGC TGCTGACGGT GCCGAAACCT TGGCTCTATG CCGGCATCCT GCTGTTCGCG
ACGCTGGGCA CCATCGGCGC CAATCCCTCG GCCTTCGAGC TGGGAATGTT GCTGGCCTTC
GGCGTGCTGG GCTATGTGAT GCGGCTTTTC GGCTATCCCA TCGCGCCTAT CGTCGTCGGC
CTGATCCTTG GCCCGATGGC CGAGCAACAG TTGCGGCGGG CGCTGGCGAT CAGCCAGGGC
GACTGGACGA CGCTGGTGCA ATCGCCCATC GCCGCCACGC TCCTGGGGAT CGCCGCGCTG
GCGCTGATCG TGCCGCTGAT CCTGCGCGCC CGCGGCAAGG GCGAGGTTCT GAGCCAGCTT
GCCGGCGACG AGGACTGA
 
Protein sequence
MSAFEFLMQG LGTAADPMML LYALIGVTLG TAVGVLPGIG PALTVALLLP VTYRLDPAGS 
LIMFAGIYYG GMYGGSTTSI LLNTPGESAS IITALEGNKM ARKGRGGPAL ATAAIGSFIA
GLIATLLLAF LAPSIVKLAL VFGPREYFAL MVLAFVTVSA AFGDSALRGL TSLFLGLALA
CVGIDQLTGQ ARLSFGVPEL LDGIEVTTMA VAMFAVGEAL FIAGQRVQVD DEVTAVKGSI
WMNRRDWARS WKPWLRGTFI GFPIGAMPAG GAEIGTFLSY ATEKKLTKHP EEFGNGAIEG
VAGPEAANNA SAAGTLVPLL TLGLPTSATA AIMLAGFQQF GLQPGPLLFA TNPTLVWGLI
ASLLIANAML LVLNLPMIGL WVKLLTVPKP WLYAGILLFA TLGTIGANPS AFELGMLLAF
GVLGYVMRLF GYPIAPIVVG LILGPMAEQQ LRRALAISQG DWTTLVQSPI AATLLGIAAL
ALIVPLILRA RGKGEVLSQL AGDED