| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0301 |
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| Symbol | |
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| ID | 4579697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 282034 |
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| End bp | 283434 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639767616 |
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| Product | L-seryl-tRNA(Sec) selenium transferase |
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| Protein accession | YP_914111 |
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| Protein GI | 119383055 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCCC GCAGCACCCT TCCCTCGATC GACAGGCTTT TGCGCCAGGC CGAGGCGCGG
GAACTGATCG CGCATCACGG GCGCGACAAT GTGGTCGGGA TGCTGCGCAG GCTGTTGCAG
GACCGGCGCA TGGCGGCGGG CCGCGGCGAC AGGGCGGCGG GCGAGAGGGC GGCGGGCGAG
GGCGTGCTGG ACGAATGCGC CGAGCGGCTG GCCGCGCAGG CTCGGCCCTC GCTGCGGCCG
GTGCTGAACC TGACCGGCAC GGTCAACCAC ACCAATCTGG GCCGCGCGCT CTTGTCGCGG
CGGGCCGCCG AGGCGGCCTT CCGGGCCATG ATCAGCGCCA CGAACCTGGA ATACGATCTT
GAGCGTGGCA CGCGCGGCGA CCGCGACAGC CATGTCGAGG CGCTGATCTG CCGGCTGACC
GGCGCCGAGG CGGCAACGGT GGTGAACAAC AATGCCGCCG CAGTGATGCT GATGCTGAAC
ACGCTGGCCT TGGGGCGCGA GGTCGTCGTC TCGCGCGGGG AACTGGTCGA GATCGGCGGC
GCCTTCCGCG TGCCCGACGT GATGGCCCGG GCCGGCTGCC GCCTGCACGA GGTCGGCACC
ACCAACCGCA CGCATCTGCG CGACTTTGCC AATGCGGTGA ACGAGGACAC CGCCGCTTTC
ATGAAGGTCC ATGCCAGCAA TTACGCCATC GAGGGCTTTA CCGCCGAGGT GCCGCAGGCC
GATCTGGCGG CGCTGGCCCG GCGCCACGGC ATTCCCTTGC TGATCGACCT GGGCAGCGGT
TCGCTGCTTG ACCTCGACGC CTTCGGCCTG CCGCCCGAGC CGACGGCGCG GCAGGCGATC
CGCGACGGTG CCGATGCGGT GACCTTCAGC GGCGACAAGC TGCTGGGCGG GCCGCAATGC
GGCATCATCG CCGGCTCGCG CGCGCTGGTG GACCGGATGC GGGCCAATCC GCTGAAACGG
GCGCTGCGGG TGGACAAGAT CATCCTGGCC GCGCTGGCCG AGACGCTGCA AAGCCATGGC
GATCCCGAAC GCGCGCGCGC CGAGATCCCG ACCCTGCGCC TGCTGACCCG GCCGCAGGAC
GAGATCCGCG CGCTGGCCGA GCGGCTTTGC CCGCCGGTCC ACGCCGCGCT GTCGGGGCTG
GCCGAGGTCC GGGTCGTCGA CTGCCTCAGC CAGATCGGCA GCGGCGCGCA GCCGGTCGAC
CTGCTGCCAA GCGCGGGCTT GGGTTTTGCC GAAACTGGCG CCGTCCCGGT CTCGCGCATC
GCGCAGGCGT TCCGCGACCT GCCGCTGCCG GTGATCGGCC GGGTGCACAA GGGGGAGTTT
CTGCTGGACC TGCGCTGCCT TGAGGACGAG ACGCCCTTCC TGGCCCAGCT CGACCGGCTG
GCGCTTGCCG GCCCGGCGTG A
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| Protein sequence | MDPRSTLPSI DRLLRQAEAR ELIAHHGRDN VVGMLRRLLQ DRRMAAGRGD RAAGERAAGE
GVLDECAERL AAQARPSLRP VLNLTGTVNH TNLGRALLSR RAAEAAFRAM ISATNLEYDL
ERGTRGDRDS HVEALICRLT GAEAATVVNN NAAAVMLMLN TLALGREVVV SRGELVEIGG
AFRVPDVMAR AGCRLHEVGT TNRTHLRDFA NAVNEDTAAF MKVHASNYAI EGFTAEVPQA
DLAALARRHG IPLLIDLGSG SLLDLDAFGL PPEPTARQAI RDGADAVTFS GDKLLGGPQC
GIIAGSRALV DRMRANPLKR ALRVDKIILA ALAETLQSHG DPERARAEIP TLRLLTRPQD
EIRALAERLC PPVHAALSGL AEVRVVDCLS QIGSGAQPVD LLPSAGLGFA ETGAVPVSRI
AQAFRDLPLP VIGRVHKGEF LLDLRCLEDE TPFLAQLDRL ALAGPA
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