| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0294 |
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| Symbol | |
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| ID | 4580199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 273336 |
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| End bp | 275105 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639767609 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_914104 |
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| Protein GI | 119383048 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACC CGACCAACAA CCAACCGCTG AATACCGCAG CCATGGCCTT TTCCTCGTCC
GCGCAGCCGG ACGGCATCGT GGACGGCACC GATGGCGACG ACTACATGGT CCCCGGCTAT
GTCGACCATC AGGGCGATGT GGTCGACGGC GCTGACGGTG TGAACGACTG GATCAACGCC
GGCGCCGGCA ACGACACCGT GAATGGCGGC GCGGGAAACG ACACCATCGA GGGTGGCGAG
GGCGACGACC TGCTGCGCGG CAATGCCGGG CACGATATCA TCCGGGGCGA CGCGGGCAAC
GACACGATCA ACGGCGATGC CGGAAACGAC ACCATTGAGG GCGGCGAGGG CGATGACCTG
CTGCGCGGCG ATGCCGGAGA CGATGTCCTG CGTGGCGGCG AAGGCAACGA TACGTTCAAC
GGCGGCATCG GAAACGACAC CATCGAGGGC GAAGAGGGCG ACGATCTTCT GCGCGGCGAC
GACGGGGACG ATCTCCTGCT GGGCGGCGTG GGCAGCGATA CGCTCAACGG CGGCTTGGGC
AACGACACCC TTGACGGCGG CGACGACGAC GACCTGCTGC GCGGCGACGA CGGGAACGAC
CTCCTGCTGG GCGGCGCGGG CAACGACACG CTCAACGGCG GCAACGGCGA CGACACCCTG
GAGGGCGGCG AGGGCGACGA CCTGCTGCGC GGCGATGCCG GGCACGACCT TTTGCAGGGC
GGCGACGGCA ACGACACGCT TGAGGGCGGG CAGGGAAATG ACGTCCTGGA AGGCGGGGAC
GGCGACGACT CGCTGATCGG CGGCCCCGGC GCGGACACGA TGACCGGCGG GGCGGGGAAC
GACCGCTTCG TGGTCAGTGG CGGCGGCGAC CTGATCACCG ATTTCGACGC GGTGACCGGC
ATCGGCGACG GACAGTCCGA CAACAACGAT TTCGTCGATC TGAACGCTTT CTACAACGGC
ACCACGCTGG CGGCCTGGAA CGCCGCCAAT CCGCATCAGA CCTACGCCTC GCCGGAAAGC
TGGATGCAGG CGGACCAGGC CGATGGCGTG CTTGATGCCG TCGGGGGCCT GCGCATTCAG
GACGGGACCG GCAATTCGGT CCTGGGCAGC CAGCTGACCA CGGAAAATAC CGGCGTGCTC
TGCTTTCTGC GGGGCACCCT GATCAAGACC GCGGATGGCG AGGTTCCCGT CGAGCAGCTG
GAACCGGGCA CCAAGGTGAT GACGCTGGAC CATGGCTGCA AGGCGCTGCG CTGGATCGGC
AAGCGCGTGC TCTCGGCCGA GGAACTGGCG GCCCAGCCCA AGCTGCGGCC GATCCGCATC
CGCGCCGAGG CCCTGGGCGA GCGCCTGCCC GAGCGCGACC TGATCGTCTC GCCCCAGCAC
CGGGTGCTGC TGCGCTCGGT CGTGGCGCGG CGGATGGTCG GCGAGGCCGA GGTCCTGCTG
GCCGCGCGCC ATCTGATCGG GCTGGACGGC ATCGAGGTGG TCGAGGACAT GCAGGAGGTG
GAATACTGGC ACTTCATGTT CGACCGGCAT GAGGTGGTGT TTTCGAACGG CGCCCCCACC
GAAAGCCTGT TCACCGGCCC CGAGGCGATG AAGGCGCTTG GCCCCGAGGC CCGGCACGAG
ATCCTTACGC TGTTCCCCCA ATTGGCGCAG CCCGAGCCGC AGCAACCCGC CGCAGCGCGG
CTGCTGATGC GCGGCCGGCA GGGGCGGCAT CTGGTGCAAC GCCTGGTCGC CAACGGCAAA
CAGCCCTTCA ACTGGGGAAA AGTGGGCTGA
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| Protein sequence | MTDPTNNQPL NTAAMAFSSS AQPDGIVDGT DGDDYMVPGY VDHQGDVVDG ADGVNDWINA
GAGNDTVNGG AGNDTIEGGE GDDLLRGNAG HDIIRGDAGN DTINGDAGND TIEGGEGDDL
LRGDAGDDVL RGGEGNDTFN GGIGNDTIEG EEGDDLLRGD DGDDLLLGGV GSDTLNGGLG
NDTLDGGDDD DLLRGDDGND LLLGGAGNDT LNGGNGDDTL EGGEGDDLLR GDAGHDLLQG
GDGNDTLEGG QGNDVLEGGD GDDSLIGGPG ADTMTGGAGN DRFVVSGGGD LITDFDAVTG
IGDGQSDNND FVDLNAFYNG TTLAAWNAAN PHQTYASPES WMQADQADGV LDAVGGLRIQ
DGTGNSVLGS QLTTENTGVL CFLRGTLIKT ADGEVPVEQL EPGTKVMTLD HGCKALRWIG
KRVLSAEELA AQPKLRPIRI RAEALGERLP ERDLIVSPQH RVLLRSVVAR RMVGEAEVLL
AARHLIGLDG IEVVEDMQEV EYWHFMFDRH EVVFSNGAPT ESLFTGPEAM KALGPEARHE
ILTLFPQLAQ PEPQQPAAAR LLMRGRQGRH LVQRLVANGK QPFNWGKVG
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