| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0283 |
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| Symbol | |
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| ID | 4580188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 261535 |
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| End bp | 262194 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639767598 |
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| Product | amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine |
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| Protein accession | YP_914093 |
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| Protein GI | 119383037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.416279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGG ACTGGGATTT CGCATGGTCC ATCATGCCGA CCCTGCTGGC CGGCTTTCGG
ATCACCCTCA TCGCCACGGT GCTTGGTGCG ATGGTTGCCG CCGTCTTGGG GCTGGTCTTT
GCCATCCTGC GCCGTTCGCC CAACCGGCTG GTCGCCCGCA CCACCGGCTT CGTGGTCGAG
TTCATCCGCG GCACGCCGCT GCTGGTGCAG CTTTACTTCA TCTTCTACGT GCTGCCCGAT
CTGGGCATCC GCCTGCCGGC GCTGACCGCC GGGGTGATCG GCATGGGGCT GCATTACGCG
ACCTATGCCG CCGAGGTCTA TCGTGGCGGC ATCGAGGCGG TGCCGCGCGG GCAATGGGAA
GCGGCCAAGG CCACCAACCT GACCACGCGC CAGACCTGGC TGCATGTCGT GCTGCCGCAG
GCCGTGCCGC CGATGATCCC GGCCATGGCG AACTACCTGC TGGCCATGTT CAAGGAAACG
CCGCTGCTTT CCGCGATCAC CGTGCTGGAA CTGATGAACC AGGCCAAGTC GGTGGCCAAC
AGCTCCTATC GCTATGTCGA GCCGATGACG CTGGTCGGCG TGATGTTCCT GGTCGTCAGC
CTGATCTCGG TCATCGGCCT GCGCTGGCTG GAACGCCGTT ATGGGAGGAT TTCGCGGTGA
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| Protein sequence | MEWDWDFAWS IMPTLLAGFR ITLIATVLGA MVAAVLGLVF AILRRSPNRL VARTTGFVVE
FIRGTPLLVQ LYFIFYVLPD LGIRLPALTA GVIGMGLHYA TYAAEVYRGG IEAVPRGQWE
AAKATNLTTR QTWLHVVLPQ AVPPMIPAMA NYLLAMFKET PLLSAITVLE LMNQAKSVAN
SSYRYVEPMT LVGVMFLVVS LISVIGLRWL ERRYGRISR
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