| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0282 |
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| Symbol | |
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| ID | 4580187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 260877 |
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| End bp | 261533 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767597 |
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| Product | amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine |
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| Protein accession | YP_914092 |
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| Protein GI | 119383036 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.3816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACT GGGCAGGATA TCTGACACTC ATCCTTATGG GGGCCTGGGT CACGGTCAAG
CTGACCCTGA TGGGTTCGGC CCTGGCGCTG GTCGTGGCCT TCGTCGCCGG GCTGGGCCGC
ATCTCGCGCC ACGCCGCGGT TCGCTGGCTG GCGACCGCCT ATATCGAGTT CTTCCGCGGC
ACCTCGATCT TCGTGCAGCT GTTCTGGATC TATTTCGTGC TGCCGATGAC CGGGGCGGAA
CTGACGCCGA TGCAGGCGGG AGTGATGGCG CTGGGGCTGA ACGTCGGCGC CTATGGGGCC
GAGGTGGTGC GTGGCGCCAT CCTGGCCGTG CCGCGTGACC AGCACGAGGC TTGCGTCGCC
GTCAACCTGA CGCGGTTCCA GCGCATGCGC CACATCATCC TGCCGCAGGC GCTGCCGCTG
ATGCTGCCGA CCTTCGGCAA CAACGCCATC GAGCTTTTGA AGGCCACCTC GGTCGTCTCG
CTGATCTCGC TCTCGGACAT GACCTTCCAG GCGCAGGTGG TGCGCTCGCA GACCGGCAGC
ACGCTGATGC CCTTCGTCAC CATCCTGCTG CTGTATTTCG CGATGTCCTC GGCGCTTTCA
TTCGGCATGC GCCGGCTGGA GCGGCGGGTG ACGCGCGGGT TGGACGGGGT GCGCTGA
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| Protein sequence | MGDWAGYLTL ILMGAWVTVK LTLMGSALAL VVAFVAGLGR ISRHAAVRWL ATAYIEFFRG
TSIFVQLFWI YFVLPMTGAE LTPMQAGVMA LGLNVGAYGA EVVRGAILAV PRDQHEACVA
VNLTRFQRMR HIILPQALPL MLPTFGNNAI ELLKATSVVS LISLSDMTFQ AQVVRSQTGS
TLMPFVTILL LYFAMSSALS FGMRRLERRV TRGLDGVR
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