Gene Pden_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0276 
Symbol 
ID4578914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp254344 
End bp254865 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID639767591 
Productputative sugar-binding protein 
Protein accessionYP_914086 
Protein GI119383030 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG TATTGCTCGA TTACGGGCAC AGGCGCATTG CGGCGCTGAA CTCTTATCGG 
CGGTTTCGCT ATGCCGCGGC CCGCGACGCG GGCTATCGCG CCGCGATGGA AGGCCGTCAT
GTGCCCGTCG ACCCGGATCT GGTTCTGGAA ACCGCGATGA CGGAAGAGGA CGGGCTGAAA
TTAGGCGCCC GGCTCTTGTC CTTGCCCGAG CCGCCGACGG CGATCATCTG CGGTTCGATC
TTCCTGGCGA AAGGCGTCTA TCGCGCCGCG GCCGAGGCGG GGCGGACCAT CGGCAAGGAT
CTGTCGGTGG TGGCCCATGA CGACCAGCTG CGCGGCATTT CGGCGGCGGA CTTCGCCCCT
GCACTGACCG CCACCCAGCA ATCCGTAGAG ATGGCAGGGC GCCGTCTGGC CGAGATCCTC
ATCGACCGGC TCGAGGGCAG GCTTGCCCCC GAGCCTGTCT GCGAAGTGTC GCGGCCCGAC
CTGATCCTTC GCGGCTCGGT CGGGCAGGGG AAGCTGGTGT AG
 
Protein sequence
MAEVLLDYGH RRIAALNSYR RFRYAAARDA GYRAAMEGRH VPVDPDLVLE TAMTEEDGLK 
LGARLLSLPE PPTAIICGSI FLAKGVYRAA AEAGRTIGKD LSVVAHDDQL RGISAADFAP
ALTATQQSVE MAGRRLAEIL IDRLEGRLAP EPVCEVSRPD LILRGSVGQG KLV