| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0270 |
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| Symbol | |
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| ID | 4578908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 245625 |
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| End bp | 249644 |
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| Gene Length | 4020 bp |
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| Protein Length | 1339 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639767585 |
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| Product | gene transfer agent (GTA) like protein |
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| Protein accession | YP_914080 |
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| Protein GI | 119383024 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.67619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTC TTATCCTTGG CGCAGCGGGC ACCGCCCTCG GCGGCGCGAT GGCCGGCACC
GTTTTCACTG CCTTCGGCAC GGCAGTAACC GGGGCAATGA TCGGCGGCGC GATTGGCTCC
ATGGCAGGCT CCATGGTCGA TGCCTGGATT ATCCAGTCCA TGATGCCAGG ACAGAAATTC
GAGGGGCAGC GCCTCGATGC GCAGCGCATC ACGTCCTCGA CCGAGGGAAC GGTGATTCCG
CGCGTGTTCG GTGCGGCCCG GATCGGCGGG AACGTCATCT GGGCGACCGA TTTCCGCGAA
GAGGTCACCA CAACGCGGCA GGGCGGCAAG GGCGGCGGCG GCGGCGTCGA AACCACCGAA
TACACCTATT ACGCATCCTT CGCGATCGCC ATCTGCGAGG GGCAGATCGG CGGCATCGGT
CGGGTCTGGG CGGACGGCGA GTTGCTCGAC ATGACGAACG TCACCATGCG GGTCTATCGC
GGTGGCGAGG GGCAGCAGCC CGACCCGCTG ATTTCCTCCC TCATGGGCGC AGATCGGACG
CCGGCTTATC GCGGGACGGC CTATGTCGTG TTCGAGGATA TGCTGCTGAC CGACTTCGGC
AACCGCATCC CGCAACTGAC CTTCGAGGTG TTCCGTCCGC TTGCTCATGC CGACTCCATC
GAAGGGCTGG CGCGGGCCGT CACCCTGTTC CCGGCAGCGG GCGAGTTCGG CTATTCGACG
CAGGTGGTGC GCACCGTCGC GGGCGTGCTC GTTCCGATAA ACTCTTCGGA GAGCGGCGAG
TTCGTCAACT CGAATGCAGC GGAGGGTAGG ACCGATTTCC GTGTCTCGCT CGACCGGCTC
GATGATATCG CACCAAACGT GATGAGCGTG TCTCTCTCCG TTCCATGGTT CGGAAATGAT
CTGCGTTGCG GAAATTGTCT GTTGAAGCCG GGGATTGAGC ACGAGCAACG GAATACGACG
CCGATTTCAT GGTCAGTGAA TGGTATCACC CGAGGTTTGT TCGGTAGTGG TGCTCATCTG
GTATCGAGGG ATGGCCAGAA CCGCCCGAAT TTCGGCGGGA CGCCCGCCGA TGTATCTGTC
GTTCAGGCGA TCAAGGCGCT GAAGAACCGC GGCAAGCGGG TGACCTTCTA CCCATCCATC
CTCATGGATA TCCCCGCCGG GAACAGCTTG CCGAATCCCT ATTCGCACAA CGCAGCCAGC
GTGGGTCAGC CGGCATTCCC CTGGCGCGGC CGGATTACCT GCTCGCCTGC GCCGGGCTTT
GCAGGAACCG TCGACAAGAC CACCGATGCA ACCGCCCAGA TCGCAGCCTT CTTCGGCAGC
GCCGCGGCGG GCGATTTCAG CGTCTCGGAT GAATCCGTGT CCTGGACCGG CGGCGAGGAT
TGGGGCTATC GCCGCATGAT CCTGCACTAT GCCTATCTGT GCGCGGCGGC TGGCGGCGTC
GATACCTTCC TGATTGGCTC CGAGCTTCGC GGGCTTACCC AACTGCGGAA CAATGCGACC
ACCGGCTATA ATGTCGTGGC CCGGTTGCGG ACTCTGGCTG CTGACGTCCG GTCCATCCTC
GGCCCAGGCA CGAAGATCAG CTACGCAGCC GATTGGTCGG AATATTTCGG CCATCATCCC
AGCGATGGAA CGGGGGATGT GTTTTTCCAC CTCGATCCGC TCTGGGCTGA CAGCAATGTC
GATTTCGTCG GTATCGACAA TTACATGCCG CTGTCCGACT GGCGTGACGG CTGGGATCAT
CTCGACGCCC AGGCCGGGGC TGGCAGCATC TACGACCTCG GGTATCTGCG CGGCAATGTC
GAGGGCGGCG AGGGCTACGA CTGGTTCTAT GCTTCGGACG CGGCGCGGAA CAACCAGGCC
CGGACGCCGA TCACGGACGC GGCTGCCGGC AAGCCATGGG TGTTCCGCTA CAAGGATATC
CGGGCATGGT GGTCCAACCA GCACCGGAAT CGGCCTGGCG GCGTCGAGCA GGGCGGCGCT
ACCGCTTGGG TTCCGCAGTC AAAGCCCATC CGGTTCACCG GACTCGGTTG TCCGGCTGTC
GACCGTGGCT CGAACCAGCC GGCTGTGTCT TTCGATCCGA AATCCTCGGA AAGCGCCCTG
CCCCATTTCT CGCGCGGCTG GCGCGACGAT TCGAACCAGC GCGCCTATAT CGAGGCCATG
CTCGGCTATT GGGCCGACAG CACGAACAAC CCCCAATCGT CGGTCTATGC CGGGCGGATG
GTGGAATCGG ACGAGTGCGC CGTCTGGGCA TGGGATACGC GGCCCTATCC GCATTTTCCG
GCGCTGACAG ATGTTTGGGT CGACGGTGAA AACTGGCGGC TCGGGCATTG GATGACAGGC
CGGCTCGGGT CCGTCTCGCT GCGGGCGCTG GTCCGAGCCT TGTGTAAAGA GGCAGGGTTG
GCCGACAGCC AGTTCGACGT CACGGGACTT CATGACGCGG TCGAGGGATA CTGCATCACG
TCCATCGAAT CCCCGAAATC CTCCATTGCG ATGCTGGCGC GGCATTTCGG GTTCGATGCC
TGCGAGACCG GCGGCCTGAT CCGCTTCGTC TCGCGCGGCC GGGCTCCCGC AGGGTCGGTC
ACGACCGCCG ATCTGGTCCG GCGCGGCGAA GGTGGGGGCG AGGTGATCGA GATGGTTCGG
GGGCAGGAAA CGGAGATCCC GCAGGCGCTG AAATGGCAGG TGGCGCGCAA CGACGAGGAA
TATGACGGGG TCATGGTCGA GGCCCGCCGT GCCACGGTCG ATTCCACACG GATCGCAGCG
GAATCCTTTT CCATCGTCGT GCCGCCCGAG GAAGCGGATC GCCGCTGCCA GCGCGCCTTG
CAGGAGGCGT GGGTGAGCCG CGAGCGCGCG ACGTTCAGTC TGCCCCCATC CCGCCTGGCG
CTCGATCCCA CTGACGTCCT GACGCTCGAG CATGATGGCC GGGGCTATGA ATATCGGCTG
ATGCAGATCG GGGATGCGGA AGCGCGCACG ATAGATTCGG TTCGGCAGGA CCGGGAAGCC
TATGACCTGC CGCCAGCCGT TACCCGGCGG GCGCACCTGT CCCGGCCCCT GCCTTATGAC
GCGCCGACGA CGATCTTTCT GGATCTGCCG CTGCTGCAAT CCAGCCAGCA GGCCCATCGC
CCGCTGCTGG CCGCGACAGC CGCGCGGTGG CCGGGACAGA TGGCGGTCTA TCGCAGCGAG
GATGAGAACG AAGGTTTCAC CCTTCTCACC ACCTTCAATC GGCGGGCTCG GATCGGCTCC
CTCGCCTTCC CGCTCCATTC GGGGCCGGTG GATCGCTTCG ACCATGGCAA CGAACTCTGG
ATCGATCTGG CCTGGGGGAC GCTGGTCAGC GTCAGCGAGC AGCAGCTTTT CTCGGGGGCG
AATGCCTTTG CCATCGAAAC GGCGCCCGGC GTCTGGGAGA TCGTGCAGGC CGCGAACGCC
GAGCTCGTCT CGCCCGGCCG CTACAGGTTG ACGAAGCTGC TACGGGGAGT CCGCGGCACG
GAATGGGCTA TGACCAGCGT CGTGGCATCC GGCGCGACCG TGGTCATGCT GGACGAGGCG
GTCATAGAGC TTCCGATCTC GGCCGAGGAT GTGGGGGTTC CCTGGTATTG GCGGGTCGGG
CCGGCCAGCA AGACGATCAG CGATGCCTCC TATCGGCAGG CGCAATTCAC GCCTCGCGCC
ATCGGGCTGG AACCTTTCGC GGGGGTGCAT GCCGTGCAGC CCTATCGGCG CGGCCGGGCG
GTGGGCGATC TGACCATCGA ATGGATCAGG CGCTCTCGGG CTCTGGCTGC CGATATCTGG
GGCAACGGCG AGGTGCCGCT GGGCGAAGAG AGCCCGGCCT ATGAGGTCGA TATCCTCGAC
GGTGCGGCGG TCAAACGGAC CTTGTCCTCG ACCACCACCA GCGTGGTCTA TACCGGCGCA
CAGCAGACTG CGGATTGGGG TGCCCCCCTC GCTCCGGGGG ATTCTCTCCG GGTCGATATC
TATCAGGTCG CGCCCGTTGC CGGTCGCGGC ATCGCCTATT CCGAAACCCT GTTCTTCTGA
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| Protein sequence | MATLILGAAG TALGGAMAGT VFTAFGTAVT GAMIGGAIGS MAGSMVDAWI IQSMMPGQKF
EGQRLDAQRI TSSTEGTVIP RVFGAARIGG NVIWATDFRE EVTTTRQGGK GGGGGVETTE
YTYYASFAIA ICEGQIGGIG RVWADGELLD MTNVTMRVYR GGEGQQPDPL ISSLMGADRT
PAYRGTAYVV FEDMLLTDFG NRIPQLTFEV FRPLAHADSI EGLARAVTLF PAAGEFGYST
QVVRTVAGVL VPINSSESGE FVNSNAAEGR TDFRVSLDRL DDIAPNVMSV SLSVPWFGND
LRCGNCLLKP GIEHEQRNTT PISWSVNGIT RGLFGSGAHL VSRDGQNRPN FGGTPADVSV
VQAIKALKNR GKRVTFYPSI LMDIPAGNSL PNPYSHNAAS VGQPAFPWRG RITCSPAPGF
AGTVDKTTDA TAQIAAFFGS AAAGDFSVSD ESVSWTGGED WGYRRMILHY AYLCAAAGGV
DTFLIGSELR GLTQLRNNAT TGYNVVARLR TLAADVRSIL GPGTKISYAA DWSEYFGHHP
SDGTGDVFFH LDPLWADSNV DFVGIDNYMP LSDWRDGWDH LDAQAGAGSI YDLGYLRGNV
EGGEGYDWFY ASDAARNNQA RTPITDAAAG KPWVFRYKDI RAWWSNQHRN RPGGVEQGGA
TAWVPQSKPI RFTGLGCPAV DRGSNQPAVS FDPKSSESAL PHFSRGWRDD SNQRAYIEAM
LGYWADSTNN PQSSVYAGRM VESDECAVWA WDTRPYPHFP ALTDVWVDGE NWRLGHWMTG
RLGSVSLRAL VRALCKEAGL ADSQFDVTGL HDAVEGYCIT SIESPKSSIA MLARHFGFDA
CETGGLIRFV SRGRAPAGSV TTADLVRRGE GGGEVIEMVR GQETEIPQAL KWQVARNDEE
YDGVMVEARR ATVDSTRIAA ESFSIVVPPE EADRRCQRAL QEAWVSRERA TFSLPPSRLA
LDPTDVLTLE HDGRGYEYRL MQIGDAEART IDSVRQDREA YDLPPAVTRR AHLSRPLPYD
APTTIFLDLP LLQSSQQAHR PLLAATAARW PGQMAVYRSE DENEGFTLLT TFNRRARIGS
LAFPLHSGPV DRFDHGNELW IDLAWGTLVS VSEQQLFSGA NAFAIETAPG VWEIVQAANA
ELVSPGRYRL TKLLRGVRGT EWAMTSVVAS GATVVMLDEA VIELPISAED VGVPWYWRVG
PASKTISDAS YRQAQFTPRA IGLEPFAGVH AVQPYRRGRA VGDLTIEWIR RSRALAADIW
GNGEVPLGEE SPAYEVDILD GAAVKRTLSS TTTSVVYTGA QQTADWGAPL APGDSLRVDI
YQVAPVAGRG IAYSETLFF
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