| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0245 |
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| Symbol | |
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| ID | 4579738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 227187 |
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| End bp | 228044 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639767560 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_914055 |
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| Protein GI | 119382999 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.267925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.770841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTT TCCGACATGG CCGGCCCGGC CGGGAACGGC CGGGACTGTT CGACATATCG
GGCAAAATGC GCGACCTGTC GCCGGTCATC CCCGATTTCG ATGCCGGCAC CCTTTCGCCG
CAGGGGCTGG CCCGGCTGGC GGGCCTTGAC GCCCGAGGCC TGCCGCTGCT GCCCGAAGGC
ACCCGCTTCG GCGCCTGCAC GGCCCGCCCC GGCAAGATCA TCTGCGTCGG GCTGAACTAT
GCCAGCACGA TGATCGAACT GGGCGTGCCG CGCCCCGAGG CGCCCTCGAT CACGATCAAG
CCCAGCTCGG CGCTGGCGGG GCCGGATGAC GACATCGCCC TGCCGCGCGG CTCGACCGCC
ACCGATTGGG AGGTCGAGCT GGCCGCCGTC ATCGGAACAT ATGCCCGGCA TGTTTCGCCG
CGGCGGGCGC TGGATAATGT CGCGGGCTAC TGCCTTGCCA ACGACCTGTC GGAACGTGAC
CACCAGCGCC ACCATGGCGG CGAAAGCGTC AAGGGCCGGG GGCATGATGG CTTCGCGCGA
CTGGGTCCGT GGTTGGTGAC GGCCGACGAA ATCCCCGACC CGCAAGGCAT TGATCTGTGG
CTGCGGATCG ACGGCAGGCG GATCCAGCAG GGATCGACCT CGGACATGCT GTGGTCGGTC
GCGGAACTGA TCGCGCATGT CTCGGACTAT ATGGCGCTGG AACCCGGAGA CGTGATCCAG
ACCGGAACCC CCGCCGGAAT CGGCATCGCG CAGAAGCCGC CGCGCTATCT GCGCGAAGGC
AACCAGGTCA GCCTGGGCGG GTCCGGGCTG GGGATGCAGC GATGCCGGGT GGTGCGGCAG
GTGATGCCCG GCAAGTAA
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| Protein sequence | MRLFRHGRPG RERPGLFDIS GKMRDLSPVI PDFDAGTLSP QGLARLAGLD ARGLPLLPEG
TRFGACTARP GKIICVGLNY ASTMIELGVP RPEAPSITIK PSSALAGPDD DIALPRGSTA
TDWEVELAAV IGTYARHVSP RRALDNVAGY CLANDLSERD HQRHHGGESV KGRGHDGFAR
LGPWLVTADE IPDPQGIDLW LRIDGRRIQQ GSTSDMLWSV AELIAHVSDY MALEPGDVIQ
TGTPAGIGIA QKPPRYLREG NQVSLGGSGL GMQRCRVVRQ VMPGK
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