| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0239 |
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| Symbol | |
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| ID | 4580819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 219738 |
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| End bp | 221327 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639767554 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_914049 |
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| Protein GI | 119382993 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.884064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCA ATCGTCGCAG AATCCTGCAC ATGTCCGTCG CGGCGGCAGC GGCAAGCCTT
GCCGGTCCGG GACTGCTGCG CGCGCAGGGA TCGGACCGCC CGATCCGCAT CGCGCTTGCC
GCCACATCGC CGCGCGCGAT CGACCCGATC TTCAGCACGC TCGGGGCCGA CAACTGGGTC
AACCTCCAAG TCTATGAGCA TCTCGTCTCG CCGCCGAATG GCAGATTCGC GACCCAGGAC
GACGAATATC GCCCGATGCT TGCCGAAAGC TGGACCAAGT CCGACGATGC CCGGACATGG
ACCTTCAAGC TGCGCAGGGA TGTCGCGTTC CACGGCGGCC ATGGCACGCT GACCCCCGAG
GACGTGGTGT TCACCTTCGA ACGCGCCATG CGTGAAGGCA TCGCCACGGC ATCCTATGCC
AATGTGCGGG GCGTCGCCGC CTCGGGCCCC GACGAGGTGA CGTTCACGCT GAACGGGCCG
GATCCGTTTT TCCTGGGGGG CGTGATCTCG ATCCCCAGTT CGCTGATCGT GTGCAAGAGC
GCGGTCGAGG AGAAGGGCGA GAATTTCGGC AAGGAACCCG TCGGCACCGG CCCCTATGCG
GTCGAACGCA TGTCAAGCAG CGGCGTCAAT ACCCTGCGCT TCGACGGCTA TTGGGGCGAG
CCTCCGAAGA CCGCGCGGAT CGACTTCCTC TATACCTCGG ATACGACCTC GCGGACGCTT
TCGCTGATGT CGGGCGACGT GGACATGATC GAGGCGGTGC GCGCGCCCGG ATGGGTGCAG
CAGATCCGGC AGCAGAACGA CGCGCTGATC GTCGATCAGA CGCAGCCGGG ATCCTTCAAC
ACCCTTTTCT TCAACCTGAC CAAGGCACCC TTCGACAATC CGCTGGTGCG CAAGGCGGTC
GCCACCGCGA TCGACAGCGC GGTGGTCGCC CAGGCGCTGG CCCCGTTCGG CGCACAGACA
TGGACGCTCT CGCCGCCCGA CTATCCCTCT GGCTGGGCCG CGGAAGATCT GCCCGAGGAT
CTGCGCTATG ATTACGATCC CGATCGCGCG CGCGAATTGC TGGCCGAGGC CGGGCACGGA
AACGGGCTGA ACTTCACCGC CAGCATCAGC CAACGCGAGG ATTACCGCTC GATCATGCTG
ATCCTGCAAG AGCTGATGCG CCCGGCCGGG ATCAACATGA ACCTGAACAT CATGGATCAC
GCGGCCTTCC ACGGCGCCAA TCGGCAGGAT GCCAACTCGC TGGTGCTGTA TTCGCAAAGC
CTTCCCCCGG TGCCGCTGGA ATACATGTCG CGCTACCTGT CCTCTGCGGC GGTGGTGAAA
TCCGATGGGA CCGGCGGCGA CAACTTCAGC CATTACGGCA TCGCCATGCC CGGCGTGGAC
GACCGGATCG AGGCGATGCG CCAGGCCACC ACGGTCGAGG AATATTCCTC GATCGGACGC
GAGATCGAGA AGAAGGTGCA AGAGGATCTG CCCCTTATGG GGGTCGGCAA CCTTGGCTAT
GCCATCGTCC GCAATCCCGC AGTCGATATC GGCTACCAGG TCGAAAGCGG CTATGCGCGC
TGGCGCCTGG ATCTGGCGCA GCGCGCCTGA
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| Protein sequence | MLINRRRILH MSVAAAAASL AGPGLLRAQG SDRPIRIALA ATSPRAIDPI FSTLGADNWV
NLQVYEHLVS PPNGRFATQD DEYRPMLAES WTKSDDARTW TFKLRRDVAF HGGHGTLTPE
DVVFTFERAM REGIATASYA NVRGVAASGP DEVTFTLNGP DPFFLGGVIS IPSSLIVCKS
AVEEKGENFG KEPVGTGPYA VERMSSSGVN TLRFDGYWGE PPKTARIDFL YTSDTTSRTL
SLMSGDVDMI EAVRAPGWVQ QIRQQNDALI VDQTQPGSFN TLFFNLTKAP FDNPLVRKAV
ATAIDSAVVA QALAPFGAQT WTLSPPDYPS GWAAEDLPED LRYDYDPDRA RELLAEAGHG
NGLNFTASIS QREDYRSIML ILQELMRPAG INMNLNIMDH AAFHGANRQD ANSLVLYSQS
LPPVPLEYMS RYLSSAAVVK SDGTGGDNFS HYGIAMPGVD DRIEAMRQAT TVEEYSSIGR
EIEKKVQEDL PLMGVGNLGY AIVRNPAVDI GYQVESGYAR WRLDLAQRA
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