Gene Pden_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0225 
Symbol 
ID4580805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp207290 
End bp207832 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID639767540 
Productflavin reductase domain-containing protein 
Protein accessionYP_914035 
Protein GI119382979 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCT TCTCGTTCCC CTGTCTTGAC GGCGATCCAG AGTTTCGCGA GAGCCTTCGC 
ACCGCGCTGC GCGGGACGGC GGTGAACGTA TCCATCCTGA CGGCAAGGGA CCGGGCGGGG
ATGAACCATG GCATCGCCGT TACCACGGCG GTGCCGTTCT CGACCTATCG GCCGGCGATG
ATCGTGGCCG TCAAGCATAG CGCCTCGGCC TATCCGGCGA TCCTGGACAG CAACTATTTC
TGCCTGAACC AGATCGCCGC CGACGAGATC GACCTGCTGG ATCGCTTCAG CAGAAGCGAT
CGCCGGACAT CGCGCTTCGC GACGGGCTGC TGGTCGGTGG GACCATTCTG CCTGCCCTAT
CTGGGCAGCG CGCTGACAAG CTATTTCTGC GATGTCCAGG GCGCGCATGA CCACGAGGAC
CAGACAGTCT TTATCGGCAG AATTGTCGGC GTTAGACTGG GAAATGACGG CACCGGCGGA
CGCGATCCCC TGATGTGGAT AAATGGACGC GCTGCGAGGC TTGCGGGTCG AGAATATGTA
TAG
 
Protein sequence
MPSFSFPCLD GDPEFRESLR TALRGTAVNV SILTARDRAG MNHGIAVTTA VPFSTYRPAM 
IVAVKHSASA YPAILDSNYF CLNQIAADEI DLLDRFSRSD RRTSRFATGC WSVGPFCLPY
LGSALTSYFC DVQGAHDHED QTVFIGRIVG VRLGNDGTGG RDPLMWINGR AARLAGREYV