Gene Pden_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0222 
Symbol 
ID4580802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp202555 
End bp203775 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content68% 
IMG OID639767537 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_914032 
Protein GI119382976 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATG AACCCCTGCA CGGCACGCGC GTCCTGGACC TGACGGCCGT GGTGGTCGGC 
CCGGCCGCGA CATGGCGCCT GGGCCAGTAC GGCGCCCAGA TCATCAAGGT CGAAAGCCCC
GGAGGCGACC TGATGCGCGG CCTTGGCGGG CTGTCCCCGA CCGGCCAGCA TGCCGGGGCC
TATCTTCACC TGAACCGGGG CAAGCGCAAC ATCTGCCTTG ACCTCAAGGC GCCGGGCGCA
TCCGGGGTGA TGGAGCGGCT TGTCGCCTGG GCCGATGTCA TCGTCGCCAA CATGCGGCCC
AAGGCGCTGG CCCGGCTGGG GCTGGACCCC GAAACGGTTC GCGCCGGGCA TCCGGGAAAG
ATCTACTGCC TGTTGACGGG ATATGGGTCC GACGGCCCTT ATGGCGGCTT TCCCACCTAT
GACAGCGTGG TTCAGGGCGC GGTCGGTCTG CCCGGTCTTG CGCTGGAACG GGACGGGACG
CCCGGATATG TCCCGCTGCT GATCTGCGAT CACGTCGTCG GAGAGATCGC GGCCGGCGCC
ATTCTGGCCG CCCTGCTGAA CCGGCACCGC ACCGGCAAGG GCGTGACGCT GGAAGTCCCG
ATGTTCGAGA CGATGGCGAC GATGGTGTTG CAGGAACACC TGGCGGCGCA GAGCTTCGAT
CCGCCTGCCG GCCCCTATGG CGACCAGCGG CTGCTCAGCC CGCATAACCG GCCGATGCGA
ACGAAGGACG GGTTCATCGC CGTCACCATC AATACCGACC CGCAGGTCAG GGCATTCCTG
GCGGCGACAG GGCGCGGCCA TCTGGCGACC GATCCAAGAT TTGCCAGCGT CGCGGCACGC
GCGGTCCATG TCGCGGAATG GTTCGAGATC CGAGGCGCGC CGCTGACCGA CAGGACCACC
GACGAATGGC TGAAGATCTT TCGCACGGCG GACCTTGCCG CCATGCCGGT CCATTCCATC
GAGAGCCTGA GCCGCGATCC GCATCTGACC GCCGTGCAGC TGATGACGCA GGAAGACCAC
CCGACAGAAG GCCGGACGAC GGTTCTGCGC AGCTCCATCC GCGCCGACGA CGCCCCCCTG
CCGCCGCGCG GCCCGGCGGC CCCGCGCGGA TGGGATACCC GCGCCGTCCT TGACGAGCTT
GGCTATACGG GCGCCGAGGC CGCGGCGCTT CTGGACCGGG GGGTGGCCGT TGCGCATTCA
TCCGCACCTG ACCGGACGTG A
 
Protein sequence
MSYEPLHGTR VLDLTAVVVG PAATWRLGQY GAQIIKVESP GGDLMRGLGG LSPTGQHAGA 
YLHLNRGKRN ICLDLKAPGA SGVMERLVAW ADVIVANMRP KALARLGLDP ETVRAGHPGK
IYCLLTGYGS DGPYGGFPTY DSVVQGAVGL PGLALERDGT PGYVPLLICD HVVGEIAAGA
ILAALLNRHR TGKGVTLEVP MFETMATMVL QEHLAAQSFD PPAGPYGDQR LLSPHNRPMR
TKDGFIAVTI NTDPQVRAFL AATGRGHLAT DPRFASVAAR AVHVAEWFEI RGAPLTDRTT
DEWLKIFRTA DLAAMPVHSI ESLSRDPHLT AVQLMTQEDH PTEGRTTVLR SSIRADDAPL
PPRGPAAPRG WDTRAVLDEL GYTGAEAAAL LDRGVAVAHS SAPDRT