Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0222 |
Symbol | |
ID | 4580802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 202555 |
End bp | 203775 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639767537 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_914032 |
Protein GI | 119382976 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATG AACCCCTGCA CGGCACGCGC GTCCTGGACC TGACGGCCGT GGTGGTCGGC CCGGCCGCGA CATGGCGCCT GGGCCAGTAC GGCGCCCAGA TCATCAAGGT CGAAAGCCCC GGAGGCGACC TGATGCGCGG CCTTGGCGGG CTGTCCCCGA CCGGCCAGCA TGCCGGGGCC TATCTTCACC TGAACCGGGG CAAGCGCAAC ATCTGCCTTG ACCTCAAGGC GCCGGGCGCA TCCGGGGTGA TGGAGCGGCT TGTCGCCTGG GCCGATGTCA TCGTCGCCAA CATGCGGCCC AAGGCGCTGG CCCGGCTGGG GCTGGACCCC GAAACGGTTC GCGCCGGGCA TCCGGGAAAG ATCTACTGCC TGTTGACGGG ATATGGGTCC GACGGCCCTT ATGGCGGCTT TCCCACCTAT GACAGCGTGG TTCAGGGCGC GGTCGGTCTG CCCGGTCTTG CGCTGGAACG GGACGGGACG CCCGGATATG TCCCGCTGCT GATCTGCGAT CACGTCGTCG GAGAGATCGC GGCCGGCGCC ATTCTGGCCG CCCTGCTGAA CCGGCACCGC ACCGGCAAGG GCGTGACGCT GGAAGTCCCG ATGTTCGAGA CGATGGCGAC GATGGTGTTG CAGGAACACC TGGCGGCGCA GAGCTTCGAT CCGCCTGCCG GCCCCTATGG CGACCAGCGG CTGCTCAGCC CGCATAACCG GCCGATGCGA ACGAAGGACG GGTTCATCGC CGTCACCATC AATACCGACC CGCAGGTCAG GGCATTCCTG GCGGCGACAG GGCGCGGCCA TCTGGCGACC GATCCAAGAT TTGCCAGCGT CGCGGCACGC GCGGTCCATG TCGCGGAATG GTTCGAGATC CGAGGCGCGC CGCTGACCGA CAGGACCACC GACGAATGGC TGAAGATCTT TCGCACGGCG GACCTTGCCG CCATGCCGGT CCATTCCATC GAGAGCCTGA GCCGCGATCC GCATCTGACC GCCGTGCAGC TGATGACGCA GGAAGACCAC CCGACAGAAG GCCGGACGAC GGTTCTGCGC AGCTCCATCC GCGCCGACGA CGCCCCCCTG CCGCCGCGCG GCCCGGCGGC CCCGCGCGGA TGGGATACCC GCGCCGTCCT TGACGAGCTT GGCTATACGG GCGCCGAGGC CGCGGCGCTT CTGGACCGGG GGGTGGCCGT TGCGCATTCA TCCGCACCTG ACCGGACGTG A
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Protein sequence | MSYEPLHGTR VLDLTAVVVG PAATWRLGQY GAQIIKVESP GGDLMRGLGG LSPTGQHAGA YLHLNRGKRN ICLDLKAPGA SGVMERLVAW ADVIVANMRP KALARLGLDP ETVRAGHPGK IYCLLTGYGS DGPYGGFPTY DSVVQGAVGL PGLALERDGT PGYVPLLICD HVVGEIAAGA ILAALLNRHR TGKGVTLEVP MFETMATMVL QEHLAAQSFD PPAGPYGDQR LLSPHNRPMR TKDGFIAVTI NTDPQVRAFL AATGRGHLAT DPRFASVAAR AVHVAEWFEI RGAPLTDRTT DEWLKIFRTA DLAAMPVHSI ESLSRDPHLT AVQLMTQEDH PTEGRTTVLR SSIRADDAPL PPRGPAAPRG WDTRAVLDEL GYTGAEAAAL LDRGVAVAHS SAPDRT
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