| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0216 |
|---|
| Symbol | |
|---|
| ID | 4579031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 198147 |
|---|
| End bp | 198683 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639767531 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_914026 |
|---|
| Protein GI | 119382970 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACC GATCCCGCCG CCTGTTCAAC GTGCTGTTCC TGTGCACCGG CAATTCGGCA
CGCTCGATCA TCGCCGAAAG CGTGCTGCGC CAGGATGGTG GGGGGCGGTT CCGGGCCTTC
TCGGCCGGCA GCCGGCCCAG GGGCGAGGTC CATCCGACTG CGCGCGGGGT GCTGGAGAAT
TTCCACTATC CGACCGAGGG GCTGCGCTCG AAAAGCTGGG ACGAGTTCGC CGGGGCGGAT
GCGCCGGTGA TGGATTTCGT CTTCACGGTC TGCGACCAGG CCGCCGGAGA AACCTGTCCG
CTCTGGCCCC GCCAGCCGAT CTCGGCACAT TGGGGCGTGC CTGATCCGGC CGCGGCCACC
GGCACGGGGC TGGAACGGGA AATGGCCTTC ATCGATACGT TGCGCATCAT GAGGAACCGG
ATCTCGGTCT TCACGGCGCT GCCGATGGCG ACCCTGAACC GCGCAAGCCT GACGGCCAGA
CTGCACCAGA TCGGGCAATC GCAGGGCGCG ACCTCGGCCC GGACGGATAT GGCCTGA
|
|---|
| Protein sequence | MPDRSRRLFN VLFLCTGNSA RSIIAESVLR QDGGGRFRAF SAGSRPRGEV HPTARGVLEN
FHYPTEGLRS KSWDEFAGAD APVMDFVFTV CDQAAGETCP LWPRQPISAH WGVPDPAAAT
GTGLEREMAF IDTLRIMRNR ISVFTALPMA TLNRASLTAR LHQIGQSQGA TSARTDMA
|
|---|
| |