Gene Pden_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0212 
Symbol 
ID4579027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp193651 
End bp195927 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content71% 
IMG OID639767527 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_914022 
Protein GI119382966 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA GGCCGCTTCC TGCCGTTCCG GCATGGGAGA CCAGGATGAC CGACAGCACC 
ACGGAGCGGC GCGAATGGAC GGTAAGCGGG ATGGATTGTG CCGCATGCAC GGTCAAGGTG
ACGCGGGCGG TCGAGCGGCT GCCCGGCGTC AGCGATGTGA AGGTCGCCCT GATGGGCGAG
CGGCTGTCGC TGGCGCTGGC CGATGGCGCG ACGGCCGCGG AAGAGATCGA GAAGATCGTC
CGCCGGCTGG GATACGGCAT TGCCCCCAGG GAACGGGAAC AGCCGCGGCA GGCGGCCCTT
GCGCCGCGCC GGCCCCATGA CGACGGCTGC GGCGGCACCT GCGGGCACGA CCGCAAGGCC
GCATCGCCCT CTGGCGCCGG GCATGGAACG CCTGCCGGGG GCAGCACGCC ATGGTATCGA
ACGGCGAAGG GGCGGCTGGT CATCCTGACC GGCGCGCTGC TTTCGCTGGC CTGGGCGTTC
GAGCTGCTGG CCCCGGCGGA ATGGGGTTAC CGGGCCTTCC TGCTGGCCTG CCTGATCGGC
GTCGCGCCGG TCGCGAAACG CGCGTTCGAG GCGCTGCGGC TGGGCCAGCC CTTCACCATC
GAAAGCCTGA TGACCATCGC CGCGACCGGC GCGCTGTTCA TCGGCGCGGC CGAGGAGGCG
GCGCTGGTCG TGTTCCTGTT CGCGGTGGGC GAGGTGCTGG AAGGTGTCGC CGCCGGCAAG
GCGCGCGACG GCATCCGGGC ATTGGCGAAC CTCGTGCCCA GGACGGCGAT CGTCGAGATC
GACGGCCAGG CCCGCGAAAC CCCCGCCGAC AGCTTGCAGA TCGGTCAGGT GGTTCTGGTC
CGCCCCGGCG ACCGCGTTCC TGCCGATGGC GAGATCCTGG ACGGCACCAG CGGCATCGAC
GAAAGCCCGG TGACCGGCGA AAGCGTTCCG CGCACCAGGG GGCCGGGCGA ACCGGTCTTC
GCAGGCTCGA TCAACGCCGA GGCCGCATTG CGTGTGCGCG TGACGCGCGA GGCATCGGAC
AACACCATCG CCCGCATCAT CCGCCTGGTC GAGGAGGCGG AAGAGGCGCG CGCCCCCACC
GAACGCTTCA TCGACCGCTT CAGCCGCTGG TACATGCCCG CCATCGTGGG TCTGGCGGCG
CTGGTCGTCG TCGTGCCGCC GCTGGCTTTC GGCGCGGAAT GGGGCACCTG GATCTATCGC
GGGCTGGCGC TTCTGCTGAT CGGCTGCCCC TGCGCGCTGG TGATCTCGGT CCCGGCCTCG
ATCGCGTCCT CGCTGTCTGC CGGGGCAAGG CGCGGAATGC TGATGAAGGG CGGCGCGGTG
ATCGAGGCCG CCGCCAGGGT CAGCCATGTG GCTTTCGACA AGACCGGCAC GCTGACCCAT
GGCAAGCCCG TCGTCACCGA TCTGATCCCG GCCCCCGGCA TCGGCGAAGC CGCATTGCTG
GAGGTCGCGG GAGGGGTCGA GGCGGGGTCC AGCCATCCGC TGGCGCAGGC GATCCTGTCG
CGGCTTGCCC AAGAGGGCGT GACGCCCTTG CCCGCCCGCG CGGCGCGGGT GCTGGTCGGC
CAGGGTGCCG AGGCGGTCGT GGGCGGCGCC CCCGCATGGG TATCCTTGCC CCGCCACGCG
GCGCAAAGGG ACGGTATCGA GGCCGACGCC CTCCGCGAGG CGACGCGGCT GGAAGGCGAG
GGCAAGACCG TCGTCGCCGT GTTCCGCGAC GGGCAGCCGC TTGGCCTGAT CGCGATGCGG
GACGAGCCGC GCGGCGATGC AGCCGAAGCG ATGCGGCAGC TGAGGGACCT GAATGTCGGC
GCGATCATGC TGACGGGCGA CAATCCCCGC ACCGCCGCCG CCATCGCGGG CGGTCTCGGG
ATGGATTATC GGGCCGAGAT GATGCCCGAG GACAAGCTGG CGGCGATCCG CGAAACCGGC
CTGCCGGGTA GCGTGATGAT GATCGGCGAC GGCATCAACG ACGCGCCGGC GCTGAAGCAG
GCGGGGATCG GCGTCGCGAT GGGATCGGGT ACCGATGTGG CGCTGGAAAC CGCCGATGCG
GCGATCCTGC GCGACCGGGT GACCGATGTG CCCGCGCTGA TCCGGCTGGC CCGCGCGACG
ATGGGGAATA TCCGCCAGAA CGTCACCATC GCGCTTGGGT TGAAGGCGGT GTTCCTGGTG
ACATCGGTCC TGGGCATCAC CGGGCTGTGG ATCGCCATTC TGGCCGATAC CGGCGCCACG
GTGCTGGTGA CGCTGAACGC CCTGCGGCTG CTGCGCTTCC GGCCGGAGCA GGCCTGA
 
Protein sequence
MMERPLPAVP AWETRMTDST TERREWTVSG MDCAACTVKV TRAVERLPGV SDVKVALMGE 
RLSLALADGA TAAEEIEKIV RRLGYGIAPR EREQPRQAAL APRRPHDDGC GGTCGHDRKA
ASPSGAGHGT PAGGSTPWYR TAKGRLVILT GALLSLAWAF ELLAPAEWGY RAFLLACLIG
VAPVAKRAFE ALRLGQPFTI ESLMTIAATG ALFIGAAEEA ALVVFLFAVG EVLEGVAAGK
ARDGIRALAN LVPRTAIVEI DGQARETPAD SLQIGQVVLV RPGDRVPADG EILDGTSGID
ESPVTGESVP RTRGPGEPVF AGSINAEAAL RVRVTREASD NTIARIIRLV EEAEEARAPT
ERFIDRFSRW YMPAIVGLAA LVVVVPPLAF GAEWGTWIYR GLALLLIGCP CALVISVPAS
IASSLSAGAR RGMLMKGGAV IEAAARVSHV AFDKTGTLTH GKPVVTDLIP APGIGEAALL
EVAGGVEAGS SHPLAQAILS RLAQEGVTPL PARAARVLVG QGAEAVVGGA PAWVSLPRHA
AQRDGIEADA LREATRLEGE GKTVVAVFRD GQPLGLIAMR DEPRGDAAEA MRQLRDLNVG
AIMLTGDNPR TAAAIAGGLG MDYRAEMMPE DKLAAIRETG LPGSVMMIGD GINDAPALKQ
AGIGVAMGSG TDVALETADA AILRDRVTDV PALIRLARAT MGNIRQNVTI ALGLKAVFLV
TSVLGITGLW IAILADTGAT VLVTLNALRL LRFRPEQA