| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0197 |
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| Symbol | |
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| ID | 4578835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 179751 |
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| End bp | 181280 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639767514 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_914009 |
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| Protein GI | 119382953 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.595176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAC TTGAGAAATC CGCCACCGTC GCCGTCATCG GCGCCGGTGC CATGGGGGCG
GGAATCGCGC AGGTCGCGGC GACGGCCGGG CATCCGGTCC TGCTGTTCGA CGTCCGCCCC
GAGGCGGCAG AGGCCGGGCG CGCGGGCATC GTGAAAATGC TGGACCGCCA GCTTGCCAAG
GGCCGGTTGA CCGCTGACGA CCGCGACGCC ATCGCCGCCC GGCTGTCGGT GGCAAAGGCG
CCTGGCGATC TGGCCCCGGC CCGGCTGGTG ATCGAGGCCA TCGTGGAAAA GCTGGAGGTC
AAGCGCGACC TGTTCGCGCG GCTTGAAGGC ATCGTGGACG ATGCCGCGAT CCTGGCCACC
AATACCTCGT CGCTGTCGGT GACGGCGATC GCGGCGGGCT TGCGTCACCC CGGACGGGTG
GCGGGGCTGC ATTTCTTCAA CCCCGCCCCG CTGATGCGGC TGGTCGAAGT GATCGCCGGC
CTCGCCTCGG ATCCGTCGGT GCTGGACCTG CTGCATGATA CCGCGCTGGA CTGGGGCAAG
GCGCCGGTGC GGGCCACCTC GACCCCCGGC TTCATCGTCA ACCGCGTGGC GCGCCCCTAT
TACGCCGAGG CGCTGCGGCT GGTCGAGGAG GGGGCGGCAG CGCCCCAGAC CATCGACGCC
ATCCTCCGCG AGGCGGGCGG CTTCCGCATG GGTCCGTTCG AATTGATGGA CCTGATCGGC
CATGACGTGA ATTTCGCGGT CACGCGCTCG GTCTTCGACG CCTATTTCGG CGATCCGCGC
TATCGCCCCT CGCTGATCCA GCAGGAACTG GTGGCCGCCG GCTGGCTGGG CCGCAAGTCG
GGCCGCGGCT TTTACGATTA CGCCGAGGGC GCGGCGCGGC CCGAACCTGC GACCGTGGCC
CCCACGCCCG CCCCGGCCCG CGTCGTGGTC GAGGGCGACC TTGGCCCCGC CGCCGCCCTG
GTTCCCGCGC TGCGCGAGGC AGGCCTGCAG GTCGATCTTG CCCCCGGCGA GGGCTGCATC
CGCGTCGGCG CCGCGCGGCT TGCGCCTGGC GACGGCCGCA TGGCGACGGC GCGGGTCGCG
GGCGGCGAGT CCGCCGATCT GGTGTTGTTC GACCTTGCGC TGGATTACGC CACCGCGACG
CGGATCGCGC TGGCCCGCGC CGACCAGACC CCGGAGGCAG CGCTTGCCGA TGCGGTGGGG
CTGTTCCAGG CGCTTGGCAA GCAGGTTTCG GTCGTGGATG ACACGCCGGG CCTCGTGGTG
CTGCGCATGC TGGCGATGCT GGCCAACGAG GCGTCCGAGG CGGTCCTGAC CCGCGTGGCG
ACGCCGGCCG ATATCGACCG CGCGATGACG CTTGGCGTGA ACTATCCCAA GGGACCGCTG
GCATGGGCCG ATACCGTTGG CCCCGCGCGT ATCCTGTCGG TGCTGGATGC GATCCATGCC
GCTTGCGGAG ACAGCCGCTA TCGCGCCTCG CAGCTTCTGC GCCGCCAGGT GGCCACCGGC
GCGCGCCTGT CGGGCGATCC GGTCGTCTGA
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| Protein sequence | MSGLEKSATV AVIGAGAMGA GIAQVAATAG HPVLLFDVRP EAAEAGRAGI VKMLDRQLAK
GRLTADDRDA IAARLSVAKA PGDLAPARLV IEAIVEKLEV KRDLFARLEG IVDDAAILAT
NTSSLSVTAI AAGLRHPGRV AGLHFFNPAP LMRLVEVIAG LASDPSVLDL LHDTALDWGK
APVRATSTPG FIVNRVARPY YAEALRLVEE GAAAPQTIDA ILREAGGFRM GPFELMDLIG
HDVNFAVTRS VFDAYFGDPR YRPSLIQQEL VAAGWLGRKS GRGFYDYAEG AARPEPATVA
PTPAPARVVV EGDLGPAAAL VPALREAGLQ VDLAPGEGCI RVGAARLAPG DGRMATARVA
GGESADLVLF DLALDYATAT RIALARADQT PEAALADAVG LFQALGKQVS VVDDTPGLVV
LRMLAMLANE ASEAVLTRVA TPADIDRAMT LGVNYPKGPL AWADTVGPAR ILSVLDAIHA
ACGDSRYRAS QLLRRQVATG ARLSGDPVV
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