| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0193 |
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| Symbol | |
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| ID | 4578831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 175536 |
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| End bp | 176624 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639767510 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_914005 |
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| Protein GI | 119382949 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.320423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGC GGAAATTCCT GGGATCAGTC GGCATTGGCG CGGCGGCGAC GACGCTTGCC
GCCCCCGCAA TCGCGCAGTC GGCGCCCCAA ATCACCTGGA GGCTGCAATC GGCCTTCCCG
ACATCCTTCG CGGCGCTCTA TCCGGCCGCG ACGACGATGG CGAAATATGT CGAGGAGATG
ACCGAGGGTC GCTTCCGCAT CCAGCCCTTC GCCGCGGGCG AGATCGTCGG CCCGAACCAG
ATCGCCGATG CCGTGGCGCA GGGCACGGTC GAGATGGGCC ATACCGCCTC GCAATATTAC
CACGGCAAGG ACCCGGCTTT CTCGTTGGGC ACGCTGCTGC CCTTCGGCTT CAACACCCGG
ATGATGGACG CCTGGCAGAT GCAGGGCGGC GGGCTTGACC TGCTGAACAC CTTCTATGCC
AAGCACGGCT TCTTCGCCCT GCCGGGCGGC AATGTCACCG CGCAGATGGG CGGCTGGTAT
CGCAAGGAAA TCAATAGCGT GTCCGATCTG GCCGGGCTGA AGATGCGGGT CGGCGGGCTG
CCCGGTTCGA TCATGGCGAA GATGGGCGTG GTGCCGACCG CCATCCCCGG CGGCGATGTC
TATGTCTCGC TTGAGCGCGG CACGATCGAC GCCGCCGAAT TCACCGGCCC CTTCGACGAG
GAACGGATGG GCCTGAACAA GGTCGCGCCC TATTACTATT TCCCGTCCTG GTGGGAAGGC
CAGGCGGCCG TCCATTTCTT CATGAACCTG CAGAAATGGG AAGAGCTGCC CGCCCATTAC
AAGGCCATCC TGCGGGCCGC CGCCGCCGTG GCGGCGGACG AGGTCGTCAC CCGCTACGAC
TATGGCAACC CGGCCGCGCT GGTGCGCCTT ATCAGTTCGG GCGCGCAGCT GCGCAACTTC
AACGAGGAAA TCATCGCGAC CGCGCTTGCC GCCTCGAAGG AAGTCTATGC CGAGCTGAAC
GAGACCAATC CCGAATGGAA GACGCTCTAT GACAGCATCG TCGAATACCG GGATTCGGCC
TATGCCTACT GGCAGCTGAC CGAGCTCAGC TACGACGCGA TGATGGCGCG TCTGCGCACC
CAGCTCTGA
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| Protein sequence | MRRRKFLGSV GIGAAATTLA APAIAQSAPQ ITWRLQSAFP TSFAALYPAA TTMAKYVEEM
TEGRFRIQPF AAGEIVGPNQ IADAVAQGTV EMGHTASQYY HGKDPAFSLG TLLPFGFNTR
MMDAWQMQGG GLDLLNTFYA KHGFFALPGG NVTAQMGGWY RKEINSVSDL AGLKMRVGGL
PGSIMAKMGV VPTAIPGGDV YVSLERGTID AAEFTGPFDE ERMGLNKVAP YYYFPSWWEG
QAAVHFFMNL QKWEELPAHY KAILRAAAAV AADEVVTRYD YGNPAALVRL ISSGAQLRNF
NEEIIATALA ASKEVYAELN ETNPEWKTLY DSIVEYRDSA YAYWQLTELS YDAMMARLRT
QL
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