Gene Pden_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0187 
Symbol 
ID4578825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp170313 
End bp170816 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID639767504 
ProductMarR family transcriptional regulator 
Protein accessionYP_913999 
Protein GI119382943 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGAA ACTGGTCAAA GGCGTTTCGG CAGGGGAATG CCGTTTACCA ATTGAATATG 
CTGGCGAATG CCACGATCCG GTCGTTCGAG GACGGATTTG TCGAGATCGT CGGGCTGGAT
ATCCGCACAA TTCGCGTGCT GCGCCTGATC GGCGACAATC CGGGCATTAC CTTCGCGGAA
ATCGCGGTGC TGGGCGCGCT GGAACGCAGC CTTGCGTCGC GCCTGATCCA GACGCTGGTG
CGCCAGGATC TTGTCGAACG GCGCAATGAT CCGAACGACG CGCGGCGCTT CGGCCTTCAT
ATCACGCCCA TCGGGCAAGA GACGCGGCGG CGCGCCGACA TGCTGTCCGA TCTGGGGCTG
GAGATCCTGT TTCAGAAGCT CGATCCGGCG GAAGCGGCGG CCTTCGTGCG CACGCTGGGA
AAGCTGGCCG ACTGGATCGA CAGCGACGAA TTCGAGCGGA AGATCCGGCA AACATATGCC
GATGCCTCAG AAAGGCTGAA GTAA
 
Protein sequence
MLRNWSKAFR QGNAVYQLNM LANATIRSFE DGFVEIVGLD IRTIRVLRLI GDNPGITFAE 
IAVLGALERS LASRLIQTLV RQDLVERRND PNDARRFGLH ITPIGQETRR RADMLSDLGL
EILFQKLDPA EAAAFVRTLG KLADWIDSDE FERKIRQTYA DASERLK