Gene Pden_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0186 
Symbol 
ID4578824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp169001 
End bp170164 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID639767503 
Productamidohydrolase 
Protein accessionYP_913998 
Protein GI119382942 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGA TCGAGGACAT CGTGGCGCAG CAGGCCGAGT TCATCGGCTG GCGGCACGCG 
CTGCATGAAA ACCCCGGCAT CGGCTTTCAG GAAACGTTCG CGGCCGAACT GGTCGAGGCC
AAGCTGCGCG AATTCGGGCT GGACGAGGTG CATCCCGGCA TCGGCGGCAC CGGCGTGGTC
GGCGTGCTGC GCGGCCGGCG GCAATCGAAC CGCGCCATCG GCCTGCGCGC CGACATGGAC
GCGCTGCCGA TCCACGAGGA AACCGGCAAG CCCTATGCCT CGAAAGTGCC GGGGGTGATG
CATGCCTGCG GCCATGACGG TCATACCGCC ACCCTGCTGG CGACCGCCTG GCACCTGTCG
CGCGACCGCG ATTTCGCGGG CACGGTCCAT TTCATCTTCC AGCCCGCCGA GGAAGGTCTG
GGCGGCGCGC TGGCGATGAT CCGCGACGGG CTGCTGGAGC GGTTTCCCTG CGACCGGATC
TATGCCTATC ACAATTTCCC CGGCATCGAG CGCGGCCATA TCTGCACCCG GCCGGGCCGG
ATGATGGCGG GCTGTTCCTT CTTCACCATC CGCCTGCAGG GCCGCGGCGG CCATGCCGCC
CTGCCCCAGA CCACGGTGGA TGCCGCGCAG ATGGCCTCGA ACATCGTGGT GACGGCGCAA
AGCATCGTCG CGCGCAACCT GGACCCGAAC GAGACCGGGA TCATCTCCTT CACCGATGTC
TATGCCGGCA CCAACAGCCA CAACGTCATC CCCGACAAGG CAGAGTTGAA AGGCTGCCTG
CGCTATTTCG ACAAGGGCGT CGGCGCGCTG ATGAAACAGC GCCTGGAAGA GGTCGCCAAG
GGCGTTTCCG CCACCTATGG CGGCCATGCC GAGATCGCGT TCGACGACAA TTTCGTGCCG
CTGGTCAACG ACCCCCAGGC GACCGTCATC GCCCTGTCGG TCGCCGCTGA AACGGTCGGC
GCGGAAAACG TCCGCGGCAA TGTCGCGCCC TTCACCGGCA GCGAGGATTT CGCCTACATG
ACCGAACAGG TGCCCGGCAG CTATGTGCTG GTGGGCGCGG GACCCGGCGC CATGCCGCAC
AATCCCGGCT TTGACTTCAA CGACGAGATC CTTGCCACCG CCGCCAGCTA TTTCTGCCGC
CTCGTCCGGG CCGAACTGGC CTGA
 
Protein sequence
MGMIEDIVAQ QAEFIGWRHA LHENPGIGFQ ETFAAELVEA KLREFGLDEV HPGIGGTGVV 
GVLRGRRQSN RAIGLRADMD ALPIHEETGK PYASKVPGVM HACGHDGHTA TLLATAWHLS
RDRDFAGTVH FIFQPAEEGL GGALAMIRDG LLERFPCDRI YAYHNFPGIE RGHICTRPGR
MMAGCSFFTI RLQGRGGHAA LPQTTVDAAQ MASNIVVTAQ SIVARNLDPN ETGIISFTDV
YAGTNSHNVI PDKAELKGCL RYFDKGVGAL MKQRLEEVAK GVSATYGGHA EIAFDDNFVP
LVNDPQATVI ALSVAAETVG AENVRGNVAP FTGSEDFAYM TEQVPGSYVL VGAGPGAMPH
NPGFDFNDEI LATAASYFCR LVRAELA