Gene Pden_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0179 
Symbol 
ID4579732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp160664 
End bp161365 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID639767496 
ProductABC transporter related 
Protein accessionYP_913991 
Protein GI119382935 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.505105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGG TGCAGAACCT GACCAGCGGC TATGACCGCA GCCAGATCCT GTTCGACATC 
TCTTTCGAGG TCGGCGCGGG CGAGGTCGTG TGCCTGATGG GCCGCAACGG CATGGGCAAG
ACCACCACGG TGCGCGCGCT GATGGGCCTG TTGCCCGCAT GGGACGGCGC CGTGGAATTC
GAGGGGCGGC AGCTGAACGG CATGTCGGCG GCGCGGGTGG CCAAGCGCGG ATTGGGGCTG
GTCCCCGAGG GCCGGCAGAT CTTTCCGAAC CTGACCGTGC ATGAAAACCT GCGCGTCGCC
GCCGCCAACC GGCGCGGCCA GCCCGATCCC TGGACCGTGG AGCGCATCTA CGAGCTGTTC
CCCGGCCTGC ACGAGCGAAT CGGATCCCAT GGCAACCTGC TATCGGGGGG CGAACAGCAG
ATGCTGGCCA TCGGCCGGGC GCTGATGACC AATCCCAGCC TGCTGATCCT GGACGAGGCG
ACCGAGGGGC TGGCCCCGGT GATCCGCGAC CAGATCTGGG ACTGCATCGC CCGGCTGCGC
GGGCTCGGCC AGTCGATCGT GGTGATCGAC AAGCATGTCA AGCGCCTGCT GGACGTGGCC
GATCGCTTCT ATGTGGTCGA AAAGGGCCGC ACCGTCTGGT CGGGCGACCC CGACCGCGTG
CGCGCCGAGG ATGACAGGAT CAAGGGCTAT CTGACCGTCT AG
 
Protein sequence
MLKVQNLTSG YDRSQILFDI SFEVGAGEVV CLMGRNGMGK TTTVRALMGL LPAWDGAVEF 
EGRQLNGMSA ARVAKRGLGL VPEGRQIFPN LTVHENLRVA AANRRGQPDP WTVERIYELF
PGLHERIGSH GNLLSGGEQQ MLAIGRALMT NPSLLILDEA TEGLAPVIRD QIWDCIARLR
GLGQSIVVID KHVKRLLDVA DRFYVVEKGR TVWSGDPDRV RAEDDRIKGY LTV