Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0179 |
Symbol | |
ID | 4579732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 160664 |
End bp | 161365 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639767496 |
Product | ABC transporter related |
Protein accession | YP_913991 |
Protein GI | 119382935 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.505105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGG TGCAGAACCT GACCAGCGGC TATGACCGCA GCCAGATCCT GTTCGACATC TCTTTCGAGG TCGGCGCGGG CGAGGTCGTG TGCCTGATGG GCCGCAACGG CATGGGCAAG ACCACCACGG TGCGCGCGCT GATGGGCCTG TTGCCCGCAT GGGACGGCGC CGTGGAATTC GAGGGGCGGC AGCTGAACGG CATGTCGGCG GCGCGGGTGG CCAAGCGCGG ATTGGGGCTG GTCCCCGAGG GCCGGCAGAT CTTTCCGAAC CTGACCGTGC ATGAAAACCT GCGCGTCGCC GCCGCCAACC GGCGCGGCCA GCCCGATCCC TGGACCGTGG AGCGCATCTA CGAGCTGTTC CCCGGCCTGC ACGAGCGAAT CGGATCCCAT GGCAACCTGC TATCGGGGGG CGAACAGCAG ATGCTGGCCA TCGGCCGGGC GCTGATGACC AATCCCAGCC TGCTGATCCT GGACGAGGCG ACCGAGGGGC TGGCCCCGGT GATCCGCGAC CAGATCTGGG ACTGCATCGC CCGGCTGCGC GGGCTCGGCC AGTCGATCGT GGTGATCGAC AAGCATGTCA AGCGCCTGCT GGACGTGGCC GATCGCTTCT ATGTGGTCGA AAAGGGCCGC ACCGTCTGGT CGGGCGACCC CGACCGCGTG CGCGCCGAGG ATGACAGGAT CAAGGGCTAT CTGACCGTCT AG
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Protein sequence | MLKVQNLTSG YDRSQILFDI SFEVGAGEVV CLMGRNGMGK TTTVRALMGL LPAWDGAVEF EGRQLNGMSA ARVAKRGLGL VPEGRQIFPN LTVHENLRVA AANRRGQPDP WTVERIYELF PGLHERIGSH GNLLSGGEQQ MLAIGRALMT NPSLLILDEA TEGLAPVIRD QIWDCIARLR GLGQSIVVID KHVKRLLDVA DRFYVVEKGR TVWSGDPDRV RAEDDRIKGY LTV
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