Gene Pden_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0174 
Symbol 
ID4579727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp156090 
End bp156743 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID639767491 
Productmaleylacetoacetate isomerase 
Protein accessionYP_913986 
Protein GI119382930 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.974523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC CGGTCCTGCA CAATTACTAT CGCAGCTCGA CTTCCTACCG GGTGCGGATC 
GCGCTGGCGC TGAAGGGTGT GGACTATGAT TACGCGGCTT TGCACCTGCG CAAGGGCGAC
CAGCGATCCG ACGCCTTCCT GGCGCTGAAC CCGCAGGGGC TGGTCCCGGC GCTGGAATGG
GGCGACGGGC AGATACTGAC CCAGTCCCTG GCGATCATCG AATACCTGGA CGAGATCATC
CCCCAGCCGC CGCTTCTGCC CTCGGACCCG GCGGGGCGTG CACGGGTGCG CAGCCTGGCG
GACATGATCG CGCTGGACAT CCACCCGATC AACAATTTGC GGGTGCTGGC CTATCTGAAA
AATCATTTCG GCGCCGATGA CGAGGCCACC GCCGAGTGGT TCCGCCATTG GGTGTCCGAG
GGCTTTGCCG CGTTGGAGGC GCGGCTGGCC CGAGATCCGC AGACCGGCAC CTTCTGCCAC
GGCGACCGCG TGGGGCTGGC CGATATCTGC CTTGCCGCCC AGATCACCAA CAATGCGCGC
TTTGGGGTGG ACATGACGCC CTGGCCCACG ATCCGCAGGA TCGGCGAGGC GCTGGCCGGG
ATCGAGGCAT TCCGGCAGGC CGCGCCCGAC CGGCAGCCGG ACAACGAAAC CTGA
 
Protein sequence
MTRPVLHNYY RSSTSYRVRI ALALKGVDYD YAALHLRKGD QRSDAFLALN PQGLVPALEW 
GDGQILTQSL AIIEYLDEII PQPPLLPSDP AGRARVRSLA DMIALDIHPI NNLRVLAYLK
NHFGADDEAT AEWFRHWVSE GFAALEARLA RDPQTGTFCH GDRVGLADIC LAAQITNNAR
FGVDMTPWPT IRRIGEALAG IEAFRQAAPD RQPDNET