Gene Pden_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0173 
Symbol 
ID4579726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp155383 
End bp156093 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID639767490 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_913985 
Protein GI119382929 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT TCGCCTTTCC GCCTCCCGCC CCCGCCAGCC TTGCCATCGA GGGCAGCGAG 
ACGCGCTTTC CCGTCCGCCG CATCTTCTGC GTGGGGCGCA ACTATGCCGC CCATGCCCGC
GAGATGGGCA AGGATCCCGA CCGCGATCCG CCCTTCTTCT TCACCAAGCC CGCCGATGCG
GTGGTCGATA CCGGGGCCGC GATCCCCTAT CCCCCCCAGA CCGCCGATTT CCACTATGAG
ATCGAGCTGA TCGTGGCCAT CGGGCAGGAC GGCGCGAATG TCTCGGTCGA AGGGGCGCGC
GAGCTGATCT GGGGTTACGG CGTGGGCATC GACCTGACAC GGCGCGACCT GCAATTGCAG
GCCCGCGACA TGGGGCGGCC CTGGGACTGG GGCAAGGCCT TCGACCTGTC CGCCCCCATC
GCGCCGCTGC ATCCGGTGGC CCAGGTCGGC CATCCCGAAC AGGGCCGCAT CTGGCTGGCC
GTCAATGGCG CGGTCAAGCA GGATGCCGAC ATCGCCGAAC TGATCTGGGA CGTCCCCGAG
ATCGTGTCCA CCCTGTCGCA TTCCATGGTG CTGCGCCGGG GCGACATCAT CATGACCGGC
ACGCCCGCCG GCGTCGGCGC CATCGTGCCG GGCGATCACG TCACCGGCGG CATCGACGGG
TTGGGCGAGA TCGCCATCGA CATCCTGCCC GGCGCGGAGC GGGCCTCATG A
 
Protein sequence
MTDFAFPPPA PASLAIEGSE TRFPVRRIFC VGRNYAAHAR EMGKDPDRDP PFFFTKPADA 
VVDTGAAIPY PPQTADFHYE IELIVAIGQD GANVSVEGAR ELIWGYGVGI DLTRRDLQLQ
ARDMGRPWDW GKAFDLSAPI APLHPVAQVG HPEQGRIWLA VNGAVKQDAD IAELIWDVPE
IVSTLSHSMV LRRGDIIMTG TPAGVGAIVP GDHVTGGIDG LGEIAIDILP GAERAS