Gene Pden_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0170 
Symbol 
ID4579723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp151979 
End bp152380 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID639767487 
Productthioesterase superfamily protein 
Protein accessionYP_913982 
Protein GI119382926 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGT TCCTTACCGA GTTCACGGTC GAATGGGGCG ATTGCGACGA GGCGGGTATC 
GTCTTCTATC CCAATTACTT CTATTGGCTG GACTGCACCT TCCAGCGCCT GCTGCGCGCG
CGCGGCCTGG GCCAGCGCCA GACTCGCGAC AGGTTCGGCG CCGTGACCCC GCTGCTGGAT
GTCGCATTGC GGTTCCGCGC CCCGGTTCGC TATGACGAGG TGCTGCGAAT CGAGGCGCGG
ATCGCCGAAT GGCAGGAACG GCGGTTCCGC ATCGGCTATA CCCTGACCAG CGGCGAACGG
CTGATCGCCG AGGGTCACGA GTTGCGCGCA TGGGCGGTTC AGACCGATGA TGGCCTGAAG
GGCGCGCCCA TCGCCGAGGA ATTCAGAAGG CTACTGGAAT GA
 
Protein sequence
MEPFLTEFTV EWGDCDEAGI VFYPNYFYWL DCTFQRLLRA RGLGQRQTRD RFGAVTPLLD 
VALRFRAPVR YDEVLRIEAR IAEWQERRFR IGYTLTSGER LIAEGHELRA WAVQTDDGLK
GAPIAEEFRR LLE