Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0161 |
Symbol | |
ID | 4579715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 145138 |
End bp | 146280 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639767479 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_913974 |
Protein GI | 119382918 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCT GGATAGCAGC CCTGGCGCTG GTCGCAATGA TGGGGACAGG TTTTTTTCTT GCCTTCCCCC TTCCGGGATC GTCCAATGGC GCGTCTCGGG TCATCGACGC CGCGACAGGG GCACATGCCG GGGTCCCGCG GCAGCATCGC GCGATGCAGC TGCTGCCGCG CGAGGTGCTT CGCGTCGCCC CCGCAACCAT TGCCGAACGT CTGACCGTCA GCGGCGAGGT CCGGCCGGTG CAGCGCGTCA TCCTGCGCGC TCAGTCGGGC GGTGTCGTGG CCGAGCTTGG CGCGCGCGAG GGCGAGGCGG TCCGGGCCGG GGATATGCTG GTCCGCTTCG ACACCGAAGA ACTCGCGGCC ACCCTGGCGC TGCGGCAAAG CGAGGTCGAG GCGACCGAGG CCCGGCTTCG CTTCGCGCGC CAGGCGCTGG AGCGGATCGA GCGCCTGGCC GAACGCACTG TCGCCACGCA GGAACAGCTT GACCAGGCGC GGCGCGAATC CGCTGTCCTG CAGGCGCAGC TCGACGGTCT CAGGGCCCAG GCCGGGATCG CGCGGGCGGC CTTGCGCGAT GCCGAGATCC GCGCGCCCTT CGACGGGGTG GTCGCCAGCC GCAGCGTGGA TGTCGGGGAA CGCGCGAGCG CCGAGGCCGA GCTGATGACG CTGGTCGATC CGACCAGACT GGAAGCACGG GTTCTCATCG CCACGCGCGA CGTGCCCCGG ATCGCGCCCG GTCAGGCCGC AGAACTGCGG ATCGACGGGC TGGAAGGCGA GACGATCGAG GGCTCGGTCC TGCGCATCAA TCCCGTCGCG AATGACGGCT CGCGCTTCAT CTCCGTCCAT ATCGGGCTGG ACGACCCGGA CGGGCGGCTG CGCGGCGGGA TGTTCGCAAC CGGCACGATC CTTGTCGAGG AACGCGCCGA TGTGCTGGCC CTGCCCGCGA CCGCGCTGCG CGAGGACGGG GACGGGGCCT ATGTGCTGCG GCTCGCGGAG GGGCAGATCG AGCGCCGGCC CGTGGTGACC GGCGCCGCCT GGAGCGGCGG ACGGATCGAG ATCCGCGACG GGATCGCATC GGGCGACACC ATCCTCATCG CCCCGCTCCC GGGTCTCGGC GAGGGCGTGC TGGCCGAAGT CTCGGGGGGC TGA
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Protein sequence | MKLWIAALAL VAMMGTGFFL AFPLPGSSNG ASRVIDAATG AHAGVPRQHR AMQLLPREVL RVAPATIAER LTVSGEVRPV QRVILRAQSG GVVAELGARE GEAVRAGDML VRFDTEELAA TLALRQSEVE ATEARLRFAR QALERIERLA ERTVATQEQL DQARRESAVL QAQLDGLRAQ AGIARAALRD AEIRAPFDGV VASRSVDVGE RASAEAELMT LVDPTRLEAR VLIATRDVPR IAPGQAAELR IDGLEGETIE GSVLRINPVA NDGSRFISVH IGLDDPDGRL RGGMFATGTI LVEERADVLA LPATALREDG DGAYVLRLAE GQIERRPVVT GAAWSGGRIE IRDGIASGDT ILIAPLPGLG EGVLAEVSGG
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