Gene Pden_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0155 
Symbol 
ID4580179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp138809 
End bp139138 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content64% 
IMG OID639767473 
Productconjugal transfer protein TrbC 
Protein accessionYP_913968 
Protein GI119382912 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3838] Type IV secretory pathway, VirB2 components (pilins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATG CCCTCCGCAT CCGTCATCAT GTCGCAATCG CCGCCATATT CGTCTGGACC 
AGCCTCGTCC TTGCACCGAC TGCCCATGCC GCCGGCTCCT CGATGCCTTG GGAGGCGCCG
CTGCAATCCA TCCTCGATTC CGTCGAGGGG CCGGTGGCCA AGATCGTCGC GGTGATCATC
ATCATCGTCA CCGGGCTGAC CCTGGCCTTC GGCGATACCG GCGGCGGCTT CCGCCGGCTG
ATCCAGATCG TCTTCGGCAT CTCCATCGCC TTCGCGGCCA GTTCGTTCTT CTTGTCGTTC
TTCAGCTTCG GCGGCGGGGC GCTGGTCTGA
 
Protein sequence
MIHALRIRHH VAIAAIFVWT SLVLAPTAHA AGSSMPWEAP LQSILDSVEG PVAKIVAVII 
IIVTGLTLAF GDTGGGFRRL IQIVFGISIA FAASSFFLSF FSFGGGALV