Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0155 |
Symbol | |
ID | 4580179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 138809 |
End bp | 139138 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639767473 |
Product | conjugal transfer protein TrbC |
Protein accession | YP_913968 |
Protein GI | 119382912 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATG CCCTCCGCAT CCGTCATCAT GTCGCAATCG CCGCCATATT CGTCTGGACC AGCCTCGTCC TTGCACCGAC TGCCCATGCC GCCGGCTCCT CGATGCCTTG GGAGGCGCCG CTGCAATCCA TCCTCGATTC CGTCGAGGGG CCGGTGGCCA AGATCGTCGC GGTGATCATC ATCATCGTCA CCGGGCTGAC CCTGGCCTTC GGCGATACCG GCGGCGGCTT CCGCCGGCTG ATCCAGATCG TCTTCGGCAT CTCCATCGCC TTCGCGGCCA GTTCGTTCTT CTTGTCGTTC TTCAGCTTCG GCGGCGGGGC GCTGGTCTGA
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Protein sequence | MIHALRIRHH VAIAAIFVWT SLVLAPTAHA AGSSMPWEAP LQSILDSVEG PVAKIVAVII IIVTGLTLAF GDTGGGFRRL IQIVFGISIA FAASSFFLSF FSFGGGALV
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