| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0152 |
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| Symbol | |
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| ID | 4580176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 135101 |
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| End bp | 135901 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639767470 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_913965 |
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| Protein GI | 119382909 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA GCACAACAGT CACCATGCGT CGCCACATTC GCGCCATTGC CAGCACGACC
GCACTGGCCC TTGCGCTGGC GACACCGCTG GCACTGGCCC CTCTCCTGAC AACCCCGGCG
CATGCTTTCT TCGGTGGCTT CGGCCGCATC GTCTACGACC CGACCAACCA TGCCGAGAAC
CTGCTGACCG CCGCCAGGTC GCTGGAGCAG ATCAACAACC AGATCGCCTC GCTGCAGAAC
GAGGCGCAGA TGCTGATCAA CCAGGCCCGC GATCTCGCCA GCCTGCCGCA TAGCTCGCTG
CAGCAATTGC AGCAGAACGT CACCCGCACC CAGCAGTTGC TCGACGAGGC CCAGAACATC
GCCTTCGAGG TGCAGGAGGT CGATCAGGCT TTCGAGCGGG AATACGGCAC GCCGGATCTC
TCGACATCCG AGCAGCAACT GCTGGCCGAT GCCCGGACGC GCTGGAGCAA CACCATGGGC
GGGCTTCAGG ACGCCATGCG CGTCCAGTCC GGCGTCACCA ACAACATCGA GGCGCAGCGG
GCCGAGATGG CCGCGCTGGT CGAGCAGAGC CAGAATGCTG ACGGCGCCTT GCAGGCCAGC
CAGGCCGGCA ACCAGTTGCT GGCCCTGCAA TCGCAGCAAC TGTCCGACCT CACCGCGCTC
CTCGCCGCCA CCGGCCGGGC CGAGGCACTG AGCGAGGCCG AGCGCTCGGC GGCGGCCGAA
CAGGGCCGCA TCCAGCGCGA ACGGTTTCTG ACACCCGGCG CCGGCTACCA GCCCGGCAAT
GCCCGGATGT TCAACGACTG A
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| Protein sequence | MTRSTTVTMR RHIRAIASTT ALALALATPL ALAPLLTTPA HAFFGGFGRI VYDPTNHAEN
LLTAARSLEQ INNQIASLQN EAQMLINQAR DLASLPHSSL QQLQQNVTRT QQLLDEAQNI
AFEVQEVDQA FEREYGTPDL STSEQQLLAD ARTRWSNTMG GLQDAMRVQS GVTNNIEAQR
AEMAALVEQS QNADGALQAS QAGNQLLALQ SQQLSDLTAL LAATGRAEAL SEAERSAAAE
QGRIQRERFL TPGAGYQPGN ARMFND
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