| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0139 |
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| Symbol | |
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| ID | 4579518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 124423 |
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| End bp | 126159 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639767457 |
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| Product | hypothetical protein |
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| Protein accession | YP_913952 |
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| Protein GI | 119382896 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG AGGACGATTT CCGCATCCGC CCCGGGGGCA TCCGCTCCAG CCGCAGCCAG
CGCGCCCGGC CTTTCGTGGT CCAGGCGCTG GCCGCCGCCC AGAAGGCGGG CGGGCGCGTC
TCGCGCAGCG GCAGGATCGT GTCGCCGGGC ACCTCGCGCT TCGGCCGGGG CCGAACTGCG
GCCGTCCGCG CCAACAGGCT GATCACCCGC CGCACGCGGC TCTGCACCGT CAAGGTCCGG
GTGGTACGCA GAACAGGGCA GGCCGCGGCG CTGCCGCGGC ATCTGGGCTA TCTCGGCCGC
GACGGCGTCA CCCGCGGTGG CGAAAAAGCC CGCATGTTCG ATCCACACAG CGACGATGCG
GACATCAAGG ACTTCGCCGA GCGCAGCGAG GACGACCGCC ACCATTTCCG CTTCATCGTC
TCGCCCGAGG ATGCCGCCGA CATGGCGGAC CTGAAGCGGT TCACCCGGGA GTTGATGGCG
CAGGCGGAAA AGGATCTCGG CACGGAGCTC GACTGGATCG CCGTCGATCA CTGGAACACC
GACAATCCCC ATGTCCATGT CATCCTGCGG GGGCGGGCCG ATGACGGCAA GGATCTGGTC
ATCTCGCGCG ACTACATCCG GGAAGGCTTG CGCGACCGGG CACAGGACCT GATCACCCGG
GAACTGGGGC CGCGCCATGA CCATGAGATC CACCGCAGCC TGATGCGGCA GGTCGAGGCG
GAACGCTGGA CCGCGCTCGA CCGCCAGCTT CTCCGCGACG CCGGCAAGCC CGGCGTCATC
GACATGGCCC CACACGTCGA TGGTCCGCGC GACGATTACC TGCCGCAAAA GGTCGGGCGG
CTGCGGCATC TGGAACGCCT CGGCCTGGCC GATCAGGTCG GGCAGGCGCA ATGGGTGATC
CGGCCCGAGG CCGAGATTAT GCTGCGCGAA CTCGGCGAGC GCGGCGACAT CATCAAGCGC
ATCCATCGGG CGCTGTCGGG GCAGGGGATC GATCGTGGGG TTTCGGACTA CGTCTTTGCC
AGCGAGGCCG ATGGCCCGAT CCTGGGCCGG CTGGTGGAAC GCGGCCATGA CGACGAGCTG
AAGGGCAGCG CCTATGTGGT GATCGACGGT GTCGATGGCC GCACCCATCA CATCCGGCTG
CCGCATTTCG ACGCCGCCGG CGATAGTGCG CCTGGATCCA TCGTCGAGCT GCGGTCTTAC
GAGGATGCGA AGGGCGCGCG CCGCACCGCG CTGGCTGTTC GTTCCGATCT GGATATCCGC
GCTCAGGTGA CCGCCAATGG TGCCACCTGG CTCGACCGCC AGGCGGTCTC TCGCGATCCT
GTGGCGCTGT CGGAGGCCGG TTTCGGCGTC GAGGTGCGCC AGGCGATGAA GCGGCGCGCG
GAACACCTGA TCGAGGAGGG TCTGGCCGAG CGGCAAGGCA GCCGCGTGAT CTTTGCACGC
CGGCTGCTCG ACCGGTTGCG CGAGCGCGAG GTCGGCGCGC TTGCCGAAAA GCTTGCCGCC
GAGACCGGCA TGTCCTACGA CCGGGCGAAC ACCGGCGATC ATGTCGCGGG CACCTATCGC
CGGCGCTTCG CCCTGGCCTC GGGTCGTTTC GCCATGATCG ACGACGGGCT GGGCTTCAAG
CTGGTGCCCT GGACGCCTTC GCTCGAACGG CATCTCGACC GGCACGTCTC GGGCGTCGCC
CGGGCGGATG GCGGCGTGGA CTGGTCCTTC GGTCGAAAGC GCGGGCTCGG GCTGTGA
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| Protein sequence | MSNEDDFRIR PGGIRSSRSQ RARPFVVQAL AAAQKAGGRV SRSGRIVSPG TSRFGRGRTA
AVRANRLITR RTRLCTVKVR VVRRTGQAAA LPRHLGYLGR DGVTRGGEKA RMFDPHSDDA
DIKDFAERSE DDRHHFRFIV SPEDAADMAD LKRFTRELMA QAEKDLGTEL DWIAVDHWNT
DNPHVHVILR GRADDGKDLV ISRDYIREGL RDRAQDLITR ELGPRHDHEI HRSLMRQVEA
ERWTALDRQL LRDAGKPGVI DMAPHVDGPR DDYLPQKVGR LRHLERLGLA DQVGQAQWVI
RPEAEIMLRE LGERGDIIKR IHRALSGQGI DRGVSDYVFA SEADGPILGR LVERGHDDEL
KGSAYVVIDG VDGRTHHIRL PHFDAAGDSA PGSIVELRSY EDAKGARRTA LAVRSDLDIR
AQVTANGATW LDRQAVSRDP VALSEAGFGV EVRQAMKRRA EHLIEEGLAE RQGSRVIFAR
RLLDRLRERE VGALAEKLAA ETGMSYDRAN TGDHVAGTYR RRFALASGRF AMIDDGLGFK
LVPWTPSLER HLDRHVSGVA RADGGVDWSF GRKRGLGL
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