| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0137 |
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| Symbol | |
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| ID | 4579516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 122855 |
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| End bp | 123550 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639767455 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_913950 |
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| Protein GI | 119382894 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.158623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAT CCGTCCTTCG CCATACTGAC GGGCGGGCTT ACGCCGCCCG CGGCATCGCC
ATTCTTCTTC TTTCCGGCCT GACAATCGCC ACCCTCCCGG CTGCCGGCCT GCTGGCGCAG
ACCGTGCAGC CAGTCGTGCG AGAATCCCGC GATCCCTTCG CGTCCCATGT CGCGGAAGCC
TCGCTGCGCT TCGGCATTCC GGCGCACTGG ATCCGCGCCG TGCGCCATGT CGAAAGCGCC
GGCAATCCGC AGGCCGTCTC GCCCAAGGGC GCCATGGGCC TGATGCAGAT CATGCCGAAG
ACATGGGCGG CGCTGCGCGC CCGCCATGCT CTCGGCGACG ATCCGTTCGA CCCGCGCGAC
AACATTTTCG CCGGCGCCGC CTATCTGCGC GAGATGCACG ACCGCTACGG CACCATCGCT
GGCATGCTGG CAGCCTACAA TGCCGGGCCG GGACGCTACG ACGAGCACCT GATCTCGGGC
CGGCTCCTGC CGGCCGAGAC CCGCGCCTAT GTCGCCGCGC TCGCGCCGCT GATGGGCGGC
GTGACGCTTC CTGGCAGTCC TCCTGCTGTC GCGCCTCCGC GCGATTGGCG CGAAGCACCG
CTCTTCACCG GCAGCATGAC CGGCAGCCCG GATGCGGAAC GAGTGCAGCC CGGCGGTCTG
TTCCTGCGCC GGTCCGACGC GGGAGCAGTG CAATGA
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| Protein sequence | MPVSVLRHTD GRAYAARGIA ILLLSGLTIA TLPAAGLLAQ TVQPVVRESR DPFASHVAEA
SLRFGIPAHW IRAVRHVESA GNPQAVSPKG AMGLMQIMPK TWAALRARHA LGDDPFDPRD
NIFAGAAYLR EMHDRYGTIA GMLAAYNAGP GRYDEHLISG RLLPAETRAY VAALAPLMGG
VTLPGSPPAV APPRDWREAP LFTGSMTGSP DAERVQPGGL FLRRSDAGAV Q
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