Gene Pden_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0120 
Symbol 
ID4580898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp110943 
End bp111620 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID639767438 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_913933 
Protein GI119382877 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0225106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC AGGAAAACAC CCCCCGCAAC CTCGTCATCA ATGCCGATTG CGTCGAGGCG 
ATGCAGGCCT TCGGCACCGG CTCGGTGGAT TTCATCCTGA CCGATCCGCC CTATGTGACC
CGGTTCCGCG ACCGGCAGGG CCGTACCGTC GCCAATGACG ACAATGCCCG CTGGCTGCGC
CCGGCCTTCG CCCAGATGCA CCGGGTCCTG AAGGACGGCG GTTTCTGCGT CAGTTTCTAC
GGCTGGAACA AGGTGGATTT GTTCGTGGAG GCCTGGAAAG CGGCTGGCTT CCGCATCGTC
GGGCATCTGG TGTTCCGCAA GCGTTATGCC TCCTCGGCGC GGTTCCTGCG CTACGAGCAC
GAACAGGCCT ATCTGCTGGC CAAGGGCGAT CCGGAATTAC CTGCGCAGCC CGTGCCCGAT
GTGCTGGATT TCCCCTATAC CGGCAACAGG TTGCACCCGA CGCAGAAGCC GGTGGCGGCG
CTGCGCCGGC TGATCGGGGC GTTCACCCAG CCCGGCGATC TGGTTCTGGA CCCGTTCAGC
GGCAGCGGTT CCACGCTGGC GGCGGCGCAT CTGCTGGGCC GCGACTGGCT CGGGGTGGAG
CTGGACGTGA GCCATTACCA GACCATCGGC AGGCGGATGG CGGCCCTGCA AGAGCGGGAC
CGGAAGGCGG CGGCATAG
 
Protein sequence
MTAQENTPRN LVINADCVEA MQAFGTGSVD FILTDPPYVT RFRDRQGRTV ANDDNARWLR 
PAFAQMHRVL KDGGFCVSFY GWNKVDLFVE AWKAAGFRIV GHLVFRKRYA SSARFLRYEH
EQAYLLAKGD PELPAQPVPD VLDFPYTGNR LHPTQKPVAA LRRLIGAFTQ PGDLVLDPFS
GSGSTLAAAH LLGRDWLGVE LDVSHYQTIG RRMAALQERD RKAAA