Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0115 |
Symbol | |
ID | 4580893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 107337 |
End bp | 108014 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639767433 |
Product | yecA family protein |
Protein accession | YP_913928 |
Protein GI | 119382872 |
COG category | [R] General function prediction only |
COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
TIGRFAM ID | [TIGR02292] yecA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.410021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00793411 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCAGAT CGGATCGGGA CCTCGATCAC CTTCACGAAC TCCTGTGGGC CCTGCCCCAG GAAAACCATC CGATGAGCCT AAGCGAGCTC GACGGCTATG TGACCGGCAT CCTGTCATGT CCCGATCTCA TCCCGCCCTC CGAATGGCTC CTCCATGTCT GGGGAGAAAC CGGCGATGCC CGGTTCCCCG ACCTGGCAAC GGCAGAAGCA ACAATCTCGG CGGTGATGGC GCATTACAAT GCCATTGCCT CGGAGATCGC ACGAAGCCCA TGGCTCGAAC CGATCTACGA GGTGGACCCG AACAGCGACG AAACGCTCTG GGAACCCTGG GTGGATGGCT TCACCCGCGC TTTGCGCCTG CGCCCCGAGG CCTGGCAGGC GGTGCTCGAA CAGGCGGATG AGGAAACGCG CTCGGCCCTG ATCTTCCTGA TGGCCCTGCA GGACATCAAC GAAGGGACCA GCACCTTCAC CGACGAAGAA ATCGACGAGA TCGATCTGGA TGCCCCCGAC CTGATCCCAA ATTGCGTCGC GGCGATCCTG CTCGTCTCGC GCCCGGGGGG CGTTCTGGAG GCAGGCAATC TCCCTCACGC CCCAACCCGC ATCAAACGTC CGGGCCGGAA CGATCCCTGC CCCTGCGGCT CGGGACGCAA ATACAAGCAA TGCTGCGGCA AGAGTTGA
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Protein sequence | MGRSDRDLDH LHELLWALPQ ENHPMSLSEL DGYVTGILSC PDLIPPSEWL LHVWGETGDA RFPDLATAEA TISAVMAHYN AIASEIARSP WLEPIYEVDP NSDETLWEPW VDGFTRALRL RPEAWQAVLE QADEETRSAL IFLMALQDIN EGTSTFTDEE IDEIDLDAPD LIPNCVAAIL LVSRPGGVLE AGNLPHAPTR IKRPGRNDPC PCGSGRKYKQ CCGKS
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