Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0111 |
Symbol | |
ID | 4580889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 102697 |
End bp | 103602 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639767429 |
Product | hypothetical protein |
Protein accession | YP_913924 |
Protein GI | 119382868 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000253104 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00222502 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCAAGA ACAATATCGC TCGGGAACAG AACTCTGAGC CAGTATTGAG GTTTCTTAAG GCTCGGACAA TCGTTTATCG GAAGGCGAAC CTCCTTGTAG GCCTACAAAT TCTTCTGACA GCGGTTGTGC CAGCACTCAT GGCAGTTGCT GGAATTTGGT TGCTTGACTG GAAAAGTTTG TTCGCTCTAG CGGGGCTTAG CATTGCTCTA GTTGATATGC TGATTATTGA TCGACGGTTA GGTAAGTTGT CTGTTGACGC AGCCAAATTA GCAGAAGAGT TTGATTGTCG TTTGTTTTCG CTGCCATGGT CTGAAATCCT GGTCGGCCAA AGGCTGTCAC CCGAGACGGT TCAGGGCTAT GTTGTAAAGT TTCGTCAAAA GAAAGAGCCA GCGATCTTGA ATTGGTATCC CGAGGCCGTG TCTACCATAC CACGCTACCT AGGCGTGCTT TTGTGTCAAC GGACAAATCT TTGGTATGAT AGCGAGCTCC GGTCGCACTA TGCTGCACTG ATCAAGTGGG CGGGAGTGGT TGGGTTCATC CTGTGCTTTG TATTGGCTTG GCGGTTGAAT TACACTCTTC AAACAACGGT GCTATCTATT TTTTCGCCAA TGTTTCCATT TTTCGCTTGG TCAATTCGAA CTTACTGGCG ACAAACAGAT GTATCAGCGG CGCAGGCAAG GAACCTGAGT TCTGCTGAAA CGTTGTGGAA GCAGGCTGTT CGTGGAACGC TATCGGAGAC AAAGCTCTGG CCAGAGATTA GAGACTTGCA GAACGCCATT TACGCTCGAC GTAGTGCAAG TCCATTAATC CTGCCATTTT TGTACTCGGT CCTTCGGCCA GGCATGGAGA ACCGAATGAG CGTGGCGGCA GAGAAGTTTA TTGAAGACAG TGGCTTGAAT AGTTGA
|
Protein sequence | MTKNNIAREQ NSEPVLRFLK ARTIVYRKAN LLVGLQILLT AVVPALMAVA GIWLLDWKSL FALAGLSIAL VDMLIIDRRL GKLSVDAAKL AEEFDCRLFS LPWSEILVGQ RLSPETVQGY VVKFRQKKEP AILNWYPEAV STIPRYLGVL LCQRTNLWYD SELRSHYAAL IKWAGVVGFI LCFVLAWRLN YTLQTTVLSI FSPMFPFFAW SIRTYWRQTD VSAAQARNLS SAETLWKQAV RGTLSETKLW PEIRDLQNAI YARRSASPLI LPFLYSVLRP GMENRMSVAA EKFIEDSGLN S
|
| |