Gene Pden_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0111 
Symbol 
ID4580889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp102697 
End bp103602 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content48% 
IMG OID639767429 
Producthypothetical protein 
Protein accessionYP_913924 
Protein GI119382868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000253104 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00222502 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCAAGA ACAATATCGC TCGGGAACAG AACTCTGAGC CAGTATTGAG GTTTCTTAAG 
GCTCGGACAA TCGTTTATCG GAAGGCGAAC CTCCTTGTAG GCCTACAAAT TCTTCTGACA
GCGGTTGTGC CAGCACTCAT GGCAGTTGCT GGAATTTGGT TGCTTGACTG GAAAAGTTTG
TTCGCTCTAG CGGGGCTTAG CATTGCTCTA GTTGATATGC TGATTATTGA TCGACGGTTA
GGTAAGTTGT CTGTTGACGC AGCCAAATTA GCAGAAGAGT TTGATTGTCG TTTGTTTTCG
CTGCCATGGT CTGAAATCCT GGTCGGCCAA AGGCTGTCAC CCGAGACGGT TCAGGGCTAT
GTTGTAAAGT TTCGTCAAAA GAAAGAGCCA GCGATCTTGA ATTGGTATCC CGAGGCCGTG
TCTACCATAC CACGCTACCT AGGCGTGCTT TTGTGTCAAC GGACAAATCT TTGGTATGAT
AGCGAGCTCC GGTCGCACTA TGCTGCACTG ATCAAGTGGG CGGGAGTGGT TGGGTTCATC
CTGTGCTTTG TATTGGCTTG GCGGTTGAAT TACACTCTTC AAACAACGGT GCTATCTATT
TTTTCGCCAA TGTTTCCATT TTTCGCTTGG TCAATTCGAA CTTACTGGCG ACAAACAGAT
GTATCAGCGG CGCAGGCAAG GAACCTGAGT TCTGCTGAAA CGTTGTGGAA GCAGGCTGTT
CGTGGAACGC TATCGGAGAC AAAGCTCTGG CCAGAGATTA GAGACTTGCA GAACGCCATT
TACGCTCGAC GTAGTGCAAG TCCATTAATC CTGCCATTTT TGTACTCGGT CCTTCGGCCA
GGCATGGAGA ACCGAATGAG CGTGGCGGCA GAGAAGTTTA TTGAAGACAG TGGCTTGAAT
AGTTGA
 
Protein sequence
MTKNNIAREQ NSEPVLRFLK ARTIVYRKAN LLVGLQILLT AVVPALMAVA GIWLLDWKSL 
FALAGLSIAL VDMLIIDRRL GKLSVDAAKL AEEFDCRLFS LPWSEILVGQ RLSPETVQGY
VVKFRQKKEP AILNWYPEAV STIPRYLGVL LCQRTNLWYD SELRSHYAAL IKWAGVVGFI
LCFVLAWRLN YTLQTTVLSI FSPMFPFFAW SIRTYWRQTD VSAAQARNLS SAETLWKQAV
RGTLSETKLW PEIRDLQNAI YARRSASPLI LPFLYSVLRP GMENRMSVAA EKFIEDSGLN
S