Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0081 |
Symbol | |
ID | 4580958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 75555 |
End bp | 77324 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639767399 |
Product | regulatory protein, LuxR |
Protein accession | YP_913894 |
Protein GI | 119382838 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.318865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGAAT CCAAACCAAA GACACCATTG GCCGATCAGC ATTTCTTTCT GTCGCCTCAG TTGAGCGAAG GCCAGAGTTC GGACGACGAT ATCGATCTGA ACATCATCGC CAGCACCTAT CGCTCGATCA TCGATGAGCA TGCTTTCGAT GAGATGGTGG CGAGTTGGGA AACCAAGCTC GCATCGTCCG GCGGAGATGC TGAGCATCCC AAAGTCTCCA AGGGGCTGTT CAGCCAGTTG CTGACCTTCC GCAACACCCT AGAAAAGCTG GATGTCCCGA CGGAAAGCGA TCCGCTGAAA CTGGCGGTTT CCGAAGTGCC CGGGCCAGCG ACTGTGCTGT CGCCAAACGG CAATGTCGCG GTCATCAACA TTGCGGGCGA GCGCGCGTTC GGCACGCGCC AGGGCGCGTT CATGGACGTT GCAGTCATCG CGCCGAATTC CCTGGAGGAC TATTGCGCTC TGTTGCGTGC CGCCACCGGA CAAGGCAACG CGGCGCAAGC GATCCTGACG ATCCTGCCGG CCACCGAGGG CTATGGCGAA TCCTTCTTGG CCGAGGGCTA CCTGATCCGC GTGCCGGGCC AGAGCGGCGC CCATATCGCC ATCCGCTCCC TGGAAATCGC CTGGGGGCCG CGGATCGCCG AGCAGTTGCA ACAGGCCTTC GGCCTGACGC AGGCCGAATC CGAGGTCGCG CATCTGTTCT TTCGTCTGCG CAACCTCGAA TCGATCGCGG CAGAGCGAGG CGTGTCGCTG CTGACGGTGC GGACTCAGAT CAAGACGATC ATGGCCAAGA TGGGTGCCCC CTCGAATATC GACCTGATGC GCCTGCTGGC CATGATCGCC AGTCGTGAAC ATGTCGGGCT TCGGGGCGAA GCCCCTGTCT GGCACGATCC CCTGGGCCGC GAAAAGCTGA TCGAGATGCC CGATGGCCGC AAGATCGCAT GGACGTGGAT AGGCGCGAAG CGGGGCGCTC CGGTAGTCAT GCTTCGCGGA TTGCCGATGA CCTATCTGCT GCCTGGCGGT GGAGAAGCCC GGCTGCGCGA CGCGGGCATC TGCCTCTACG TTCCGTCGCG ACCCGGTCAC GGGAACAGCA CCATGGACTC CTCGCTTGAT GTGATGAGCG ACAATCTTGT TGCATTGCGG GTCTTTCTCG ACCAGGTCAT CGGCCGCCCT TGCCTTGGCG TCGGATTGGC CAGCGGCACC TTGCCTCTCG TCGTCGAAGC GGTGGCAAAT CCAGCGCGTT TCCACGGGAT ACTGGCAGTC GGTTTCTCGT GCGGGATCGA CCCTTCGGGA GTCCAGCGCC TGCCGCAGAT TCAACGCATC ATGCTGCAAC TCGCAGACAG CGCGCCATGG GTTGCCGAAC TGATGGCCAA ATCGGGGCAT CGGATGATGC GCCAGCACGG CCTGGACTGG TATCTGGAAC GCGCCTTCCG CCATACGCCG CTGAACCAGC AAACGGTGCG CAACCCCGAT TGGACGGCAT TGATCCGGAA CGCCTGTGAA CATCTGCTGA AGCAGGGCCA TGCGACCTTT GTGCGGGAAT TGCAGCTTTC GCGCCACCGC ATGGACACCG CGCTGCGCGA GTTGCGCATA CCCATGCGAT ATCTGGCGCC CACCGAAGAT CCCGGCATCG ATCTTGCTTC GTGCAGGCAA CTGGAAAGGA TCAATCCCCT GATCACCGTC GAGCCGGTCA CCGATGCGGC CGAGTTGGTT TTTTACCAAC GCAATGATCT CATCCTTGAT CGTATCATCG CCTTGGTACA CCGAAACTGA
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Protein sequence | MLESKPKTPL ADQHFFLSPQ LSEGQSSDDD IDLNIIASTY RSIIDEHAFD EMVASWETKL ASSGGDAEHP KVSKGLFSQL LTFRNTLEKL DVPTESDPLK LAVSEVPGPA TVLSPNGNVA VINIAGERAF GTRQGAFMDV AVIAPNSLED YCALLRAATG QGNAAQAILT ILPATEGYGE SFLAEGYLIR VPGQSGAHIA IRSLEIAWGP RIAEQLQQAF GLTQAESEVA HLFFRLRNLE SIAAERGVSL LTVRTQIKTI MAKMGAPSNI DLMRLLAMIA SREHVGLRGE APVWHDPLGR EKLIEMPDGR KIAWTWIGAK RGAPVVMLRG LPMTYLLPGG GEARLRDAGI CLYVPSRPGH GNSTMDSSLD VMSDNLVALR VFLDQVIGRP CLGVGLASGT LPLVVEAVAN PARFHGILAV GFSCGIDPSG VQRLPQIQRI MLQLADSAPW VAELMAKSGH RMMRQHGLDW YLERAFRHTP LNQQTVRNPD WTALIRNACE HLLKQGHATF VRELQLSRHR MDTALRELRI PMRYLAPTED PGIDLASCRQ LERINPLITV EPVTDAAELV FYQRNDLILD RIIALVHRN
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