Gene Pden_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0072 
Symbol 
ID4580949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp67679 
End bp69196 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content65% 
IMG OID639767390 
ProductCHAD domain-containing protein 
Protein accessionYP_913885 
Protein GI119382829 
COG category[S] Function unknown 
COG ID[COG5607] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCG GCGACGAAAC CTATTATCTC TCTGCCACGC GCCTGGGCGA CCTGGCCGGG 
CGCGACGTGC AGAACCTCAC GCCGCTGTTG GAATGGGCGG AGGGCAGCCG CCCCTTTGCG
ATCCGCGACT GTTTCGATCA GAGCTTGCGC ATGTCGCGGC GCCTGCTTCT GGAAGACGGC
AGCCGGCTGG AGTTGATATC GGCCGCGGGC GAGGTCTTGC GCCAGCCCGC CACGCCGCAA
GCGCGCTTTG TCGCAGAATT CGCCAAAGGG CCGGTCAAGA TCGCGCTGGC CGGTCTGTCT
CCGCTGCGTG CGCTGCTGCC CGTTGCCTCG GGCATGGCCC GATCCGGCCG GCTGGCGCTG
GTCGATGGCG AGGGCAAGAC CCGCGCGCGG GCTGAACTGC GAGAATTGCA GCCGACCGAT
GGCAATGCCG TGATCCTGGT GAGGCCGCAG GGGCTGCGCG GCTATGACAG GGCCCTTCAC
GATCTGGTCG CGCATCTCCG CGACTGCGGG GGAACGCCGT TCGGGGCGGG CAATCTCTAC
CGGATGATCG ACCCGGCCAA CACCGGCTAT GTGGCAAGGC CGAAGATCGA GGTCGGGCGC
GAGGAAACCG CATTCGACGC GGCAAATGAC CTGATCGACG GTCATCTGCC CGTCGCCCGC
GCGAATGAGC AAGGCATCGT CGCGGATCTG GATACCGAAT TCCTGCATGA CTATCGCGTC
GCCCTGCGCA AGATCCGCTC GGTGCTGAGC CTGTTCAAGG GCGTCTACGA CCCCGAGCAG
ACGGCCGGGT TGAAGGCGCG CTTCTCTGCG CTGATGGTGC CGACCGGGCC GTTGCGCGAC
CTCGACGTCT ATCTGCTGGC CCAGCAGGAT TTCTGCGATC TTGTCCCGGA AAGGATGCAT
GCCGGGCTGG ACAGGATGTT CGCGCGGCTT CGCGACCGGC GGGCGGCAGA GCATGCCAAG
CTGGCCGCCC ATCTGCGCAG CAAGGGCTAT CAAAAGGAAA TCAAGGCCCT GGCCAAGCTG
TTTGCCAGGC GACGCAAGCT GCTGCCCGGC CCGAATGCCA GCCGCGCCTC TTTTGATCTG
GCCTGCGAAC TGATCTGGAA GCGTTATCGC CGGATCCGCC GCATCGCGGC CGGCCTGACG
GCCGAGACGC CCGACGAGGA GGTTCACGCG TTGCGCATCG AATGCAAGAA GCTGCGCTAC
CTGATGGAAT TCTTCGGCCC GGTCTTTCCC CGCGGCGATT TCCAGAAGGT TCTCAAGCCG
CTGAAGGAAC TCCAGGATTC GCTGGGTCTG TTCAACGACT ATGCGGTGCA GCAGACCAGG
CTCCAGGCCT TCGCGGACGA TCTCGGCGAT GCGCCGCACA AGCTCGACAT CGCCCAGAGC
GTCGGTGCGC TGGTCATCGT GCTGCATCAG AAACAGCTCG CTGAGCGAGA GAAGATCGCC
GCAACCTTCG CGCGCTTCAA CAGCGGCAGG ATGCAGCGCA CCATCCGCAG ATTGTTCCAT
GAAGGAAAGG GTTCCTGA
 
Protein sequence
MITGDETYYL SATRLGDLAG RDVQNLTPLL EWAEGSRPFA IRDCFDQSLR MSRRLLLEDG 
SRLELISAAG EVLRQPATPQ ARFVAEFAKG PVKIALAGLS PLRALLPVAS GMARSGRLAL
VDGEGKTRAR AELRELQPTD GNAVILVRPQ GLRGYDRALH DLVAHLRDCG GTPFGAGNLY
RMIDPANTGY VARPKIEVGR EETAFDAAND LIDGHLPVAR ANEQGIVADL DTEFLHDYRV
ALRKIRSVLS LFKGVYDPEQ TAGLKARFSA LMVPTGPLRD LDVYLLAQQD FCDLVPERMH
AGLDRMFARL RDRRAAEHAK LAAHLRSKGY QKEIKALAKL FARRRKLLPG PNASRASFDL
ACELIWKRYR RIRRIAAGLT AETPDEEVHA LRIECKKLRY LMEFFGPVFP RGDFQKVLKP
LKELQDSLGL FNDYAVQQTR LQAFADDLGD APHKLDIAQS VGALVIVLHQ KQLAEREKIA
ATFARFNSGR MQRTIRRLFH EGKGS