Gene Pden_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0063 
Symbol 
ID4580940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp56428 
End bp57324 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID639767375 
Productputative sulfite oxidase subunit YedY 
Protein accessionYP_913876 
Protein GI119382820 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0824415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA AATGGTCCGA GGTGACGCCC GAAGCGGATT ACCTGAACCG GCGGGCCTTT 
CTGGCCGCGG GCATCGCGGC GCTGGCGACG CCCGCCCTTG GGCTGGGGGG GGCGCCCTCG
GCCTTTTCGA CCGACGAGGC GGTGAACAGC CTCGAGGACA TCACTCATTA CAACAACTTC
TATGAGTTCG GCACCGGCAA AAGCGATCCG GCGCAATATT CCGGCAGCCT GAAGACCTCG
CCCTGGTCGG TGACGATCGA CGGCATGGTG GACCGGCCCG GCAATTACGG GGTCGAGGAT
CTGGCGCCCG AATCGGCGCT GGAGGAGCGC ATCTATCGCC TGCGCTGCGT CGAGGCCTGG
TCGATGGTCA TCCCGTGGCT GGGGGTGCCG CTGGCCGGCG CTCTGGACAA GGCGGGCGTG
CAGCCGGGCG CGAAGTTCGT GGCCTTCCGC ACGCTTCACG ACCCCGAGCA GATGCCCGGC
CAGCGCAGCC GCATCCTGGA CTGGCCCTAT CGCGAGGGGT TGCGGCTGGA CGAGGCCATG
CATCCGCTGA CGATCCTGGC GACCGGGCTT TACGGCCGGG TGCTGCCCAA CCAGAACGGC
GCGCCGATCC GGCTGGTGGT GCCGTGGAAA TACGGCTTCA AGTCGATCAA GTCGGTGGTG
GGGATCACCC TGACGGACAC GCAGCCGCAA TGCAGCTGGC AGATGATGCA GCCCGGCGAA
TATGGTTTTT ATGCCAATGT GAACCCGCAG GTTGATCATC CGCGCTGGTC GCAGGCCACC
GAAAGACGGA TCGGCAAGGG GCTTTTCGGC GGACGGCAGG ACACGCTGAT GTTCAACGGC
TATGGCGATC AGGTGGCCGG GCTCTATGCG GGCATGGACC TCGCGAAGCA TTACTGA
 
Protein sequence
MTMKWSEVTP EADYLNRRAF LAAGIAALAT PALGLGGAPS AFSTDEAVNS LEDITHYNNF 
YEFGTGKSDP AQYSGSLKTS PWSVTIDGMV DRPGNYGVED LAPESALEER IYRLRCVEAW
SMVIPWLGVP LAGALDKAGV QPGAKFVAFR TLHDPEQMPG QRSRILDWPY REGLRLDEAM
HPLTILATGL YGRVLPNQNG APIRLVVPWK YGFKSIKSVV GITLTDTQPQ CSWQMMQPGE
YGFYANVNPQ VDHPRWSQAT ERRIGKGLFG GRQDTLMFNG YGDQVAGLYA GMDLAKHY