Gene Pden_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0058 
Symbol 
ID4579089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp50750 
End bp51301 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID639767370 
ProductNUDIX hydrolase 
Protein accessionYP_913871 
Protein GI119382815 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.993982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGGT GGGCTGCCGA TGGCGCTGGT GGTCACCGCG GTGCTGACCG GGGTGATCTG 
GCTGGTGCTG CGGCGTATCT TCGGCAGGAA CCGGGGCGAG GTGCGACACT GGACACGCGA
CATCAACGAC AACTAGGCTT TGTCGGTGCC AATCTGGTGC TGACCCATGG CGCGCATCTG
CTGACCTGCC TGCGCGACGA TTACCGCTGG ATTCGCTTTC CGGCGCATTG GGACCTGCCG
GGCGGCGCCG CCGAACCGGG CGAGACGCCG GTCGAATGCG CCCTGCGCGA GCTTGAGGAG
GAATTCGGGC TGCGGCTTTC CGCCGGGCGG CTGACGGGAC AGCCCTTCGT TTCGGTCCAC
GCTCCGCCCC GCGCTTCGTG GCTGTTTTGC GGCACGATCA CCGCCGCAGA GATCGCCGCG
ATCCGCTTTG GCGACGAGGG GCAGGAATGG CGGATGATGC CGATTGCGGA ATTCGTCGCC
CATCCGCGCG CCGTGCCGCA TTTCCGGGAT CGGGTGCGGC TCGTTCTTGC CGGAGCGGGC
TGCGGGATTT GA
 
Protein sequence
MAGWAADGAG GHRGADRGDL AGAAAYLRQE PGRGATLDTR HQRQLGFVGA NLVLTHGAHL 
LTCLRDDYRW IRFPAHWDLP GGAAEPGETP VECALRELEE EFGLRLSAGR LTGQPFVSVH
APPRASWLFC GTITAAEIAA IRFGDEGQEW RMMPIAEFVA HPRAVPHFRD RVRLVLAGAG
CGI