| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0046 |
|---|
| Symbol | |
|---|
| ID | 4579077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 36818 |
|---|
| End bp | 37519 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639767357 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_913859 |
|---|
| Protein GI | 119382803 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.214766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACA CCCCCCTGAT CGCCATTCTC GACGACGAGC CCGAAATCCG CCGCCTGCTA
TCCTCGGCGC TGGAGGAGGC CGGTTTTCGC ACCGTCAGCT TCGCCCGCGC CACCGAATTC
GAGGCGGCGC TGCGCCGCAT CCAGCCCGAT GCCTGCCTGA TCGACCTGGG CCTGCCCGAC
CGCGACGGGC TGGCGCTGGT CCACCGGCTG GCCAGCGAAT CCGGCGCGGC GATCATCATC
ATCTCGGGCC GGGCGCAAGT GCAGGACCGC GTGACCGGGC TGGAGTTGGG CGCCGACGAC
TACATCATCA AGCCCTTCGA TCCGGCCGAG GTGGTGGCCC GCATCCGCGC GCGGCTGCGC
AAGCCGCAGC GCGAGACCGG CCCCGGCCGC CAGCAGATCC GCTTTGCCGG CTGGTCCGCG
GATTTCGACC GCTATACGCT GACCTCGCCC GAAGGGGCCG AGACCCCGAT CAGCCATGCC
GAGGCCGAGG TGCTGCGGCT GTTTCTCGAC AATCCACGCC GGCTGATCTC GCGCGCGCAG
ATGCTGGAAA CGCTGGGAGG CACGGCGGGC GAAAGCTTTG ACCGGGCGAT GGACGTGCGC
ATCTCGCGCC TGCGCACCAA GCTGGGCGAA GACCCCAAGA ACCCACGCCT GATCAAGACC
ATCTACGGCG CGGGCTATAT CTTCCTGGCC GAACTGGGCT AG
|
|---|
| Protein sequence | MTDTPLIAIL DDEPEIRRLL SSALEEAGFR TVSFARATEF EAALRRIQPD ACLIDLGLPD
RDGLALVHRL ASESGAAIII ISGRAQVQDR VTGLELGADD YIIKPFDPAE VVARIRARLR
KPQRETGPGR QQIRFAGWSA DFDRYTLTSP EGAETPISHA EAEVLRLFLD NPRRLISRAQ
MLETLGGTAG ESFDRAMDVR ISRLRTKLGE DPKNPRLIKT IYGAGYIFLA ELG
|
|---|
| |