| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0034 |
|---|
| Symbol | |
|---|
| ID | 4578888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 28038 |
|---|
| End bp | 28796 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639767345 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_913847 |
|---|
| Protein GI | 119382791 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCG CAGCGGCCTC GGTTCGCGGC CGTGCATGGG TCGGCGATGC GCCACTGTTC
GCGCCCGTCG ATCTGGTGCT GCACCCGGGC GGCTGGACCT GCCTGCTTGG CCCCTCGGGC
GTCGGCAAAT CGACCATCCT GCGCCTGATC GCCGGGATGG AAACCGGCGC GCGCTTCGAG
GGCGAGGTAA CGCGCAACCG TCCCGTCGCG TTGATGGCGC AGGATTCCGG GCTGATCCCC
TGGCTGGACG TGACCGGCAA TGTCACGCTG GGCGCGCGCC TGCGCGGCAC GCTGCGAGCT
TCTGCGTCGT CCCAACACGC CGATGGGCAG CCCGGGCAGG AAGCAGACCC AACCGCCCGC
GCGGTCGCGC TGATCGAGGC CGTTGGCCTT ACCGACCGTG CCCATCACCT GCCCGCCAAT
CTTTCGGGCG GCCAGCGCCA GCGCGTCGCC CTGGCCCGCA CGCTGTTCGA GGACCGGCCG
CTGGTGCTGC TGGACGAGCC CTTCTCGGCG CTCGATGCGC GCACAAGGGC GCAGATGCAG
GATCTGGCGG CACGGCTGCT GGACACCCGC ACGGTGCTGC TGGTCACCCA CGACCCGGCC
GAGGCCGCGC GGCTGGGCGA CCGCATCCTG CTGCTGCGCG AGACGGGGCT GACCGACTGG
CCCATCGCCA GCCCGCGTCC GAAAGCCGCC GCCCGGCCCT ATGACGCACC CGAGGTGCTA
AGCCTGCAAG CCGATCTGAT GCGCGGGATG ATGGCATGA
|
|---|
| Protein sequence | MTAAAASVRG RAWVGDAPLF APVDLVLHPG GWTCLLGPSG VGKSTILRLI AGMETGARFE
GEVTRNRPVA LMAQDSGLIP WLDVTGNVTL GARLRGTLRA SASSQHADGQ PGQEADPTAR
AVALIEAVGL TDRAHHLPAN LSGGQRQRVA LARTLFEDRP LVLLDEPFSA LDARTRAQMQ
DLAARLLDTR TVLLVTHDPA EAARLGDRIL LLRETGLTDW PIASPRPKAA ARPYDAPEVL
SLQADLMRGM MA
|
|---|
| |