Gene Pden_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0015 
Symbol 
ID4578556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp12535 
End bp13119 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content65% 
IMG OID639767326 
Productglutathione-dependent formaldehyde-activating enzyme 
Protein accessionYP_913828 
Protein GI119382772 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02820] S-(hydroxymethyl)glutathione synthase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGATA CATCGGGGGT GAAGATCCAC CCCGCAGTCG ACAACGGCAT CAAGCCGGCC 
CAGCCCGGGT TCGCGGGCGG CACGCTGCAT TGCAAGTGCA GCACCAACCC GGTCCGGGTC
GCGGTCCGGG CGCAGACCGC CCACAACCAT GTCTGCGGCT GCACGAAATG CTGGAAGCCC
GAGGGCGCGA TCTTTTCGCA GGTGGCGGTG GTGGGCCGCG ATGCGCTCGA AGTGCTGGAA
GGCGCCGAAA AGCTCGAAAT CGTCAATGCC GAGGCCCCGA TCCAGCGCCA TCGCTGCCGG
GATTGCGGCG TGCACATGTA TGGCCGGATC GAGAACAGGG ACCATCCCTT CTACGGGCTG
GATTTCGTCC ATACCGAGCT TTCCGACGAG GACGGCTGGT CGGCGCCGGA ATTTGCGGCC
TTCGTCAGCT CGATCATCGA ATCGGGGGTC GATCCCAGCC GCATGGAGGC GATCCGCGCC
AGATTGCGCG AACTGGGGCT GGAGCCCTAT GATGCGCTTT CGCCGCCGCT GATGGATGCG
ATCGCCACCC ATATCGCGAA ACGGTCCGGC GCTCTTGCGG CCTGA
 
Protein sequence
MVDTSGVKIH PAVDNGIKPA QPGFAGGTLH CKCSTNPVRV AVRAQTAHNH VCGCTKCWKP 
EGAIFSQVAV VGRDALEVLE GAEKLEIVNA EAPIQRHRCR DCGVHMYGRI ENRDHPFYGL
DFVHTELSDE DGWSAPEFAA FVSSIIESGV DPSRMEAIRA RLRELGLEPY DALSPPLMDA
IATHIAKRSG ALAA