Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2735 |
Symbol | |
ID | 4569979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 3126453 |
End bp | 3127289 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639767303 |
Product | rhomboid family protein |
Protein accession | YP_913143 |
Protein GI | 119358499 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.77359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAATA ACAGCCAGCC ATACAGTCCC GGGGGGTTCC AGGTAATTCC CCCGGCTATA AAGCTTATCA TTCTTGCCAA TGTGGCGATA TTTTTATTCC AGACCAGCGG ACTTGGCGCA TTTATTACCG CCTATGGAGC GTTGTGGCCG ATCAATTCGC ATAACGACAC TGGCCTCTCG TTTCAGATAT GGCAACCGGT AACCTACATG TTTCTTCATG GCAGCATGGG GCACCTGTTC TTCAATATGT TCGCGCTCTG GATTTTCGGA ACGGAGATTG AAAATTACTG GGGAACCCGT CAGTTCACGA TCTATTATTT TATCTGCGGC ATCGGAGCCG CACTTATCAA CCTGCTGACG ACCATCGGAG ACCCGTACTC TACTGTCGGC GCTTCGGGAG CTATTTACGG CATTCTCCTC GCTTTCGGGA TGATGTTTCC TGAACGGTAC ATCTATCTCT ATTTTCTGCT TCCGGTTAAA GCAAAATATT TTGTTGCGGG CTATGCCTTT CTTGAATTCA TTTCGGGCCT TGGCAGCAGA ACTATGGGCA GCGGAAGCAA TATCGCGCAT TTCGCCCATC TCGGCGGTAT GCTTGTCGGG TTTATCTACA TAACCCTGAA ACGTCAGGAG TGGTCGCTTT CCCGTTTCAT CAGCAAGGCT CGCCCTGCTC TTCCGAAAAA GAAGAGCGCA GCGATCCACA ACATCAGTTC CGGCACTACC AAACCGTCAG AAGAGGAAAT CGACGCCATT CTTGACAAGA TCTCGCGTAA CGGTTATGAA TCATTAACCG GGCAGGAACG ACAAAAACTG CTCAAAGCGG GGGGCAAAGA GTCATGA
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Protein sequence | MNNNSQPYSP GGFQVIPPAI KLIILANVAI FLFQTSGLGA FITAYGALWP INSHNDTGLS FQIWQPVTYM FLHGSMGHLF FNMFALWIFG TEIENYWGTR QFTIYYFICG IGAALINLLT TIGDPYSTVG ASGAIYGILL AFGMMFPERY IYLYFLLPVK AKYFVAGYAF LEFISGLGSR TMGSGSNIAH FAHLGGMLVG FIYITLKRQE WSLSRFISKA RPALPKKKSA AIHNISSGTT KPSEEEIDAI LDKISRNGYE SLTGQERQKL LKAGGKES
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