Gene Cpha266_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2557 
Symbol 
ID4569013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2932812 
End bp2934107 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content55% 
IMG OID639767122 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_912969 
Protein GI119358325 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.543166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCAAC ACACCAAATC AGCAGAACTC TTTGAAAAAG CAAAGCAGTT TATTCCCGGC 
GGCGTAAACT CTCCGGTTCG CGCATTTAAA TCCGTCGGCG GCACGCCGAT TTACATGGCT
AAAGGCAGAG GCGCCTACCT TACCGATGTT GATGGCAACA GCTACCTTGA CTATGTCGGT
TCATGGGGCC CGTTTATCCT CGGCAGCATG CACCCCAGAA TCACGGCGGC GCTTGAGTAT
ACCCTCAAAA ATATCGGCAC AAGCTTCGGC ACCCCGATCG AGATGGAAAT CGAAATCGCT
GAACTGCTCT GTAAAATCGT ACCCTCTCTT GAAATGGTCC GCATGGTCAA CAGCGGCACC
GAAGCGACCA TGTCGGCGGT ACGCCTTGCC CGAGGATACA CCGGACGCGA TAAAATCATC
AAATTCGAAG GGTGCTATCA TGGCCACGGC GACAGCTTCC TCATCAAAGC CGGCTCGGGC
GCGCTCACGC TCGGAGCCCC CGACAGCCCC GGCGTCACCA AAGGAACAGC CCTCGACACC
CTCAACGCCA CCTACAACGA CATCGAATCG GTAAAACTCC TCGTCGAGGA AAACAAGAAC
AACATTGCCG CAATCATCAT CGAACCGGTT GCCGGCAACA CCGGGGTCAT ACCCGCAAAA
CCGGGATTCC TTGCAGACCT ACGCAACCTT TGCGACCAGA ACGGCATTGT CCTGATTTTT
GATGAAGTCA TGTGTGGCTT CCGCGTTGCG CTCGGCGGAG CACAAAGCCT CTACGGAGTA
ACGCCCGACC TGACCACCAT GGGTAAAATC ATCGGCGGCG GCCTTCCTGT CGGAGCATTC
GGCGGAAAAC GCAAAATCAT GGAACGCGTA GCCCCGCTTG GCGACGTCTA TCAGGCAGGC
ACCCTGTCCG GCAACCCGCT GGCGCTCACC GCCGGTCTCG AGACCCTCAA AATCCTCATG
GACGAAAATC CATATCCGGA ACTTGAAAGA AAGGCGGCAA TACTTGAAGC CGGCTTCCGC
GACAACATGC AGAAACTCGG ACTCAACTTC GTACAGAACC GCGTCGGCTC CATGGCCTGC
CTCTTCTTCA CCGAAACACC GGTCGAAAGC TATGCCAGCG CCATCACCGC CGACATCAGG
AAATACGGAA AATATTTCCA CTCCATGCTC GAACAAGGAA TCTATCTCGC CCCGTCGCAA
TTCGAGGCCA TGTTCACCAG CAGCATGCAT ACCGATGAAG ATCTCGATAA AACCATCAAA
GCAAACTTCA ACGCGCTGCA GATTGCATGC AGTTGA
 
Protein sequence
MLQHTKSAEL FEKAKQFIPG GVNSPVRAFK SVGGTPIYMA KGRGAYLTDV DGNSYLDYVG 
SWGPFILGSM HPRITAALEY TLKNIGTSFG TPIEMEIEIA ELLCKIVPSL EMVRMVNSGT
EATMSAVRLA RGYTGRDKII KFEGCYHGHG DSFLIKAGSG ALTLGAPDSP GVTKGTALDT
LNATYNDIES VKLLVEENKN NIAAIIIEPV AGNTGVIPAK PGFLADLRNL CDQNGIVLIF
DEVMCGFRVA LGGAQSLYGV TPDLTTMGKI IGGGLPVGAF GGKRKIMERV APLGDVYQAG
TLSGNPLALT AGLETLKILM DENPYPELER KAAILEAGFR DNMQKLGLNF VQNRVGSMAC
LFFTETPVES YASAITADIR KYGKYFHSML EQGIYLAPSQ FEAMFTSSMH TDEDLDKTIK
ANFNALQIAC S