Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2476 |
Symbol | |
ID | 4568830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2848359 |
End bp | 2849300 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639767035 |
Product | periplasmic solute binding protein |
Protein accession | YP_912888 |
Protein GI | 119358244 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00202006 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTCA TCCCGATCAG ATTCATTGCC ATTGCGCTTC TTCTGCTTTT TCCTTTTTTT TATTCCGGCT GTGTCTCAAA ACCTGTTGAG AAACGGTTGC AGGTTGTCGC TTCGATTGCA CCGCTTGCCT ACTTTGCTGA AAAGATTGGC GGTGGTTACG TGACGGTTTC CGTTATGGTT CCTCCTGGCG GTAATCCTCA TACCTATGAA CCGACGCCAA GGCAGATGTC GATGCTTGGC AGCGCGAAGC TGTTTATAAA GGCAGGGTCC GGCGTTGAGT TTGAACTGGA TTTGATGCAG AAGATTATGT CGATGTATCC TGTTCTCAGG ATCTGTAACG CCGCTTCGGG CATTCATTTA AAGCCTGCAG AGCATGATGG TGAGCATAGC GAAAGGCACG ATTATCCAGA TGAGCATAGC GAAAGGCACG ATTATCCAGA TGAGCATCGT CATGGCCTTG TTGATCCTCA CTACTGGCTT TCGCCTCGAA ATGCTCTGGT TATTGCAGAG AATGTTGAGA GATCTCTTAT CGAAGCCGAT CCCGAGCGTA CTGTCTTTTA TCAGGCCAAT GCCGACAGGT TGAAGCAAGA GCTGCATGGG CTTTCAAGCG AGATTCATGT AAAGCTTGCG TCGGTCTCGA ATCGTCGTTT TCTTGTTTTT CATCCCGCAT GGGGTTACTA TGCTTCGGAT TTTGCGCTGG AGCAGATTGC CGCAGAAGAG GAGGGTAAGA CGCTGACCCC CCGCCAGCTT GGGCGAGTCA TTCAGAAAGC CAGAACAAAC GGGATAAGAG TTGTCTTTGT GTCCCCTCAG TTCAGCACCG TACAAGCGGA GACCATCGCA AGGGAAATAG GAGGTGTTAC CCGGGCTGTC GATCCTCTTG CTTTTGAGTA TCAGGAAAAT CTTCTCCGCG CTACCGATGC CTTCAAGGGA GGAATGCAGT GA
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Protein sequence | MFFIPIRFIA IALLLLFPFF YSGCVSKPVE KRLQVVASIA PLAYFAEKIG GGYVTVSVMV PPGGNPHTYE PTPRQMSMLG SAKLFIKAGS GVEFELDLMQ KIMSMYPVLR ICNAASGIHL KPAEHDGEHS ERHDYPDEHS ERHDYPDEHR HGLVDPHYWL SPRNALVIAE NVERSLIEAD PERTVFYQAN ADRLKQELHG LSSEIHVKLA SVSNRRFLVF HPAWGYYASD FALEQIAAEE EGKTLTPRQL GRVIQKARTN GIRVVFVSPQ FSTVQAETIA REIGGVTRAV DPLAFEYQEN LLRATDAFKG GMQ
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