Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2420 |
Symbol | rplB |
ID | 4569487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2796080 |
End bp | 2796874 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639766979 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_912832 |
Protein GI | 119358188 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00126121 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCTACC CCGGATTTGA CGAGATCACG AAAAGTGAGC CGGAAAAAAG TCTGCTTGTT CCCGTAAAAA GGACAGGTGG AAGAAACCGT GCTGGCAGGA TTACCTCTCG CCATATGGGC GGCGGACATA AAAGGCATTA CAGGATTATA GACTTCAAGC GCAACAAGGA TGGGGTACCT GCAACAGTTG CATCTATTGA GTATGATCCG AATCGATCAT CAAGAATTGC ATTATTGCAT TACAATGATG GAGAAAAACG TTATATTCTC GCCCCGAAAG GTTTAAAGGT GGGAGAAAAG GTGGAGAGTG GTGAGAAGGT CGAAATCAAG ACCGGGAACA CCATGCCGTT GAAAAATATC CCGCTTGGTA CCGATATACA TAATGTCGAA ATGCGTGCCG GTAAGGGTGG ACAGATTGTC AGATCGGCGG GAGCTTTTGC GGTTCTTGCT GCCCGTGAAG GCGATTATGT GACGTTGAAA CTGCCTTCCG GCGAAATCAG AAAAGTAAGG GTTGAGTGTC GCGCTACCAT TGGTGTTGTC GGTAATGCTG AACATGAAAA TATCGTACTT GGTAAAGCAG GCAGAAGTCG CTGGCTTGGT ATTCGGCCTC AGACAAGAGG TATGGCAATG AACCCTGTCG ATCATCCGAT GGGCGGTGGT GAAGGTAAAT CGAAATCTGG TGGTGGCAGA AGGCATCCAA AGTCGCCATG GGGTCAGCTT GCCAAGGGAC TTAAGACAAG AAACAAGAAG AAAGCATCAC AGAAATTGAT AGTTCGCGGC AGAAATGCCA AGTAA
|
Protein sequence | MSYPGFDEIT KSEPEKSLLV PVKRTGGRNR AGRITSRHMG GGHKRHYRII DFKRNKDGVP ATVASIEYDP NRSSRIALLH YNDGEKRYIL APKGLKVGEK VESGEKVEIK TGNTMPLKNI PLGTDIHNVE MRAGKGGQIV RSAGAFAVLA AREGDYVTLK LPSGEIRKVR VECRATIGVV GNAEHENIVL GKAGRSRWLG IRPQTRGMAM NPVDHPMGGG EGKSKSGGGR RHPKSPWGQL AKGLKTRNKK KASQKLIVRG RNAK
|
| |