| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2397 |
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| Symbol | rpsD |
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| ID | 4568619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2784955 |
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| End bp | 2785566 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639766955 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_912809 |
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| Protein GI | 119358165 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0284002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT TTAGAGGCTC AATAACAAAA GTATCCCGCA GGTTAGGTAT TGCGCTTTCT
CCGAAAGCCG AGAAATATCT TGAAAGAAGA CCATTTGCGC CAGGGCAGCA CGGGCAGTCA
AGAAAAGGTA AAATCTCTGA ATACGCACTT CAGCTCAGAG AGAAACAGAA AATGAAATAC
CTTTATGGGG TTCTTGAAAA TCAGTTCAGG AGTTATTACA GAAAGGCCGT TTCACAGCGT
GGCGTCACTG GTGACAACCT TGTAAAGCTG CTTGAAAGGC GATTTGACAA TGTCGTGTTC
AGGAGTGGTT TTGCGGCGTC ACGATCAGCG GCGCGTCAGC TTGTCACCCA TGGACATCTT
ACGATAAACG GTAAAAAAGT CAATATCCCG TCATACTTGC TCACACCCGG CGAACTGATT
GAGTTTCGTC AGAAGAGCAA AAATATGGGG GCTGTTACGG ATTCCCTGAA CAAGGCGCCC
GATGCTCGCA TACCTTCATG GATTCAGGTT GACAAGGCAA ACCAGAAGGC CGTTTTCCTT
AGTGTTCCTG AAAGAGAGGA AGTGCAGGAG CCGTTTAACG AGCAGCTTGT TGTCGAGCTC
TACTCGAAGT GA
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| Protein sequence | MARFRGSITK VSRRLGIALS PKAEKYLERR PFAPGQHGQS RKGKISEYAL QLREKQKMKY
LYGVLENQFR SYYRKAVSQR GVTGDNLVKL LERRFDNVVF RSGFAASRSA ARQLVTHGHL
TINGKKVNIP SYLLTPGELI EFRQKSKNMG AVTDSLNKAP DARIPSWIQV DKANQKAVFL
SVPEREEVQE PFNEQLVVEL YSK
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