| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2365 |
|---|
| Symbol | |
|---|
| ID | 4569623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 2750406 |
|---|
| End bp | 2751110 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639766923 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_912777 |
|---|
| Protein GI | 119358133 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.114405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT TCAGTGACAG GGTAGTGGTG ATTACCGGAT CGTCGGGAAA TCTTGGAAGG
GTTGTCGCCG ATGCGTTTTA TCATGCTGGA GCGGCGCTTG CCCTTGTGGA TCTCAACCAT
AACTCTTGCG ACGAAGAGTC CGTTGATTCA GGCAGGAAGT TCCGGGTTGC CGGCGATCTT
CTCAGTTCAG TTGAGGCTGA TGCGGTTATT GAAAAAATAA TAAAGCATTA TGGTCGGATC
GATGTACTTG TAAATATTGC CGGCGGGTTT GTTGCGGGAG CGCCTGTTCA TGAAACATCT
CGCGAAAGCT GGGAGTACAT GCTCAACCTC AATGCCGGAA CGGCATTCAA TACTGCGCGG
GCAGTCGTTT CAGGTATGAG GGCTCAGGGA CGGGGATGGA TTATCAATAC GTCCGCACGG
GCCGCATTGG CGGGTAAAGC GGGAATGGCA GCCTATGTCG CTTCGAAATC GGCAGTAATA
CGTCTTACCG AAACGCTTGC GGAAGAGAAT AAACGGGAGG GCCTCAACGT GAACTGCGTG
TTGCCGGGCA TTCTCGACAC CCCCTTGAAC AGGTTATCTA TGCCCCAGGC CGATTTCAGT
TCATGGGTTT CTCCCGAAGC GCTTGCGGAT GTCGTTCTCT TTCTTGCTTC AGATGCGTCA
AGGGCTATCA ACGGGGCTTC CATTCCTGTG TATGGAACAG GGTGA
|
|---|
| Protein sequence | MDLFSDRVVV ITGSSGNLGR VVADAFYHAG AALALVDLNH NSCDEESVDS GRKFRVAGDL
LSSVEADAVI EKIIKHYGRI DVLVNIAGGF VAGAPVHETS RESWEYMLNL NAGTAFNTAR
AVVSGMRAQG RGWIINTSAR AALAGKAGMA AYVASKSAVI RLTETLAEEN KREGLNVNCV
LPGILDTPLN RLSMPQADFS SWVSPEALAD VVLFLASDAS RAINGASIPV YGTG
|
|---|
| |