Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2309 |
Symbol | |
ID | 4570947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2642486 |
End bp | 2644057 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639766870 |
Product | integrase catalytic subunit |
Protein accession | YP_912724 |
Protein GI | 119358080 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGACAC AGTTAAAAAA GCTAACCATG TACAACAAAG TTAAGGAATT TGCCCGAGAA GGATTAAGCA TCCGCCAAAT CAGTCGAAAG ACGGGCATGG ACAGAGTGAC GGTGCGCAAG TTCCTCCGCA TGACCGATGA GGAATTCAGT GCGTTTCTTG CTCTGCAGAA GCGGCGCCTC CGAAAATTGC AGCCTTATGA ACAGTTCGTC AAGGATAGGG TTACCGACTA TCCTGACTGC AGTGCAACTC AAGTTGAAGA CTGGCTGAAG GAGCATCACC CTGTTTTTCC GGAGGTAACG ACTCGAACGA TCTACTCTTT TGTCCAGTGG ATCCGAAAAG CCTATGATCT TCCAAAACCG AAAGGAACCC CTCGTGCCTA TCATCCGGTC GAGCAACTTC CTTACGGAGA GCAGGCGCAG GTTGATTTCG GTGAGTACTG GATGGCGAGT GCTGATGCCT GCAAAGTGAA GGTGCACTTC ATGATCATGC TGCTCTCCCG AAGCCGCAGG AAGTTTGTCA GCTTCAGCCA GCAACCGATT ACGACCCGTT TTGTGCTTGA GGCTCATGAA CAGGCATTTT CTTTTTTTGA GGGCATACCG CACACACTGG TCTATGATCA GGATTCCACC ATTGTTACCG ATGAGAACCG GGGTGCTATC CTCTATACTG AGGCATTCAG GAAATACCTG TTGCACCGCA GTCTGAAGAT CCATCTCTGT CGGAAAAGCG ATCCGGAAAG CAAAGGAAAA ATCGAGGCCG GCGTCAAATA TGTGAAGTAC AACTTCCTGC CGGGGCGACG CTTCGTCAAT CTTGAAGTCC TGAACCAGGA AGCGTTGCTC TGGCTTGAAC GAACAGCCAA TGCCAAGGAA CATGCCACAA CGCGGCTGAT ACCTGATGCT GAATGGCAGG TGGAGAAACA GCATCTTCGT CCTTTTGAAC CCTTACCCTA TCCGATTTCC GGTACTGTCG GTAAAGAGTA TCACGTTCGC AAAGACAACA CGATCTCGTA TCGAGGGAAT TTCTATAGCC TGCCGGTCGG CACCTATGCA GGGCCGGGGA CACTGGTTGT GCTGGAAGTC AGGCAGAACA CCCTTTGTCT CTATGCTCAA GAGGGCAGGT TGCTGGCCAA TCACCCGATT GAGAGCGGCA AAGGCACCGT GGTGATCAAC AACAACCATC GCCGTGATAC CTCCTCCAAA CTGCGAGAGT TGCAGGATTC GCTCATGCTG CTTTTCACCA ATCAGGAACA CGCGGAACGG TTTCTTGAAA GCATCCACAA CCGTTATCCC CGATACAGTC GAGACCAGTT CCTGCATGTA CGCAATGCCA TCAGCGGATG CCAGCAGAAG CTGATTGATG ATGCCCTCGC ACACTGTGTC GATCATCATC TCTTTTCGTC CGGTGAGTTC CATGATATCC TGCACCATTA CCGGAAGCAG GAGGAAAAAC AGAGTCATCA GGCGGTGTTC AACACCTTCC GCCCGAAAAC ACTCCGAAGT GATATGGACA GGATGCTCTC GTTCGTGCCG GACAGCAGTG GCATAACCAC CTATGAAAAC ATTTTCAGTT AA
|
Protein sequence | MRTQLKKLTM YNKVKEFARE GLSIRQISRK TGMDRVTVRK FLRMTDEEFS AFLALQKRRL RKLQPYEQFV KDRVTDYPDC SATQVEDWLK EHHPVFPEVT TRTIYSFVQW IRKAYDLPKP KGTPRAYHPV EQLPYGEQAQ VDFGEYWMAS ADACKVKVHF MIMLLSRSRR KFVSFSQQPI TTRFVLEAHE QAFSFFEGIP HTLVYDQDST IVTDENRGAI LYTEAFRKYL LHRSLKIHLC RKSDPESKGK IEAGVKYVKY NFLPGRRFVN LEVLNQEALL WLERTANAKE HATTRLIPDA EWQVEKQHLR PFEPLPYPIS GTVGKEYHVR KDNTISYRGN FYSLPVGTYA GPGTLVVLEV RQNTLCLYAQ EGRLLANHPI ESGKGTVVIN NNHRRDTSSK LRELQDSLML LFTNQEHAER FLESIHNRYP RYSRDQFLHV RNAISGCQQK LIDDALAHCV DHHLFSSGEF HDILHHYRKQ EEKQSHQAVF NTFRPKTLRS DMDRMLSFVP DSSGITTYEN IFS
|
| |