Gene Cpha266_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2214 
Symbol 
ID4569436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp2542907 
End bp2544001 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content54% 
IMG OID639766783 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_912637 
Protein GI119357993 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAGA GAACCCGAAG AATTGATGCT GAAACGAGCC GGGAGTCGGA TGGTGGCATA 
GTACCGGAGA AGCAGCCGAA CAAAGCGAAC CCTGAAGCTG CGGAGGTTGT GGAGGGAAGG 
CCACCAGCCA AGAGGAACAC CGGAGAGAAA GCCATCGAAT GGACACAGAG CCAAAACCCG 
ATGTCTTGCG GACTCGAAGG TGTGCGAAGA AAAGCCAAAG AAGACAAGAC CTGTTGCTTC 
ACGGCCCTGC TGCATCACAT CACCCCCGAC ATGCTGAGTA CCAGCTTCTA CGAGCTGAAC 
CGAAAAGCAG CGGAAGGGAC AGATGGAAAA AGCTGGAAAA CGTACGAAGC GCAGCTCGAA 
GAACGCCTGC CGAAGCTGCA CGAAGAAATC CACACAGGCA GCTACCGGGC CCAACCGGTC 
AAGAGGGTGT ATATCCCGAA AACCGATGGC CAGAAACGCC CGCTGGGCAT AACGGCCATA 
GAAGACAAGC TTGTCCAGCA AGCAGTTGTC ACGGTACTGA ACCAGATATA CGAAACCGAA 
TTCTATGGGT TCTCCTATGG ATACCGGCCA GGCCGAGCCC CGGAAAACGC GCTGGATGCC 
CTGGCAACAG CGATACTGAA ACGTCCGATC AACTGGATAC TGGACGCGGA CTTGCAGAAA 
TTCTTCGACA GCATCCCGCA CGACAAACTG ATGGCCCTCA TCAGCATACG CGTTGGCGAC 
AAACGGATAC TGCGCCTTAT CGGAAAATGG CTCAAGACGG GATATATCGA AGACGGGAAG 
CGATACCGGC AAACAGAAGG CACACCGCAG GGATCGGTGA TCTCACCACT GCTTGCCAAC 
ATCTATCTTC ACTACGTGGT GGACGAATGG GTCGAACAGG AGAGACGTCG CCGAAACAAC 
GGCGAAGTCA TCATCATCAG GTACGCCGAC GATCTTGTGC TGGGATTCCA GTACAAGACA 
GAAGCGGAAA GATACCTTGA GGCTCTGAGT GAACGAGTAC AAACGTACGG ACTGAAACTG 
CACCCCGAGA AAACGAGCCT GAAAGAATTC GGAAGATATG CCGAAGAAAG GCGGCGGAAA 
CGCGGGGAGG AATAG
 
Protein sequence
MKERTRRIDA ETSRESDGGI VPEKQPNKAN PEAAEVVEGR PPAKRNTGEK AIEWTQSQNP 
MSCGLEGVRR KAKEDKTCCF TALLHHITPD MLSTSFYELN RKAAEGTDGK SWKTYEAQLE 
ERLPKLHEEI HTGSYRAQPV KRVYIPKTDG QKRPLGITAI EDKLVQQAVV TVLNQIYETE 
FYGFSYGYRP GRAPENALDA LATAILKRPI NWILDADLQK FFDSIPHDKL MALISIRVGD 
KRILRLIGKW LKTGYIEDGK RYRQTEGTPQ GSVISPLLAN IYLHYVVDEW VEQERRRRNN 
GEVIIIRYAD DLVLGFQYKT EAERYLEALS ERVQTYGLKL HPEKTSLKEF GRYAEERRRK 
RGEE