| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2102 |
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| Symbol | metH |
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| ID | 4569633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 2435219 |
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| End bp | 2438968 |
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| Gene Length | 3750 bp |
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| Protein Length | 1249 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639766684 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_912538 |
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| Protein GI | 119357894 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.876734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACT CGCTTATAAA CCTGCTTGAA ACCCGTATTC TTGTGCTGGA CGGAGCCATG
GGCACCATGA TCCAGCGGCA TAAATTACAG GAAGAGGATT ACCGGGGTAC AAGATTTGCC
TCACATTCGC ACCCGCTCAT CGGCAACAAC GACATGCTTG TCCTTACTCA GCCGGACATC
ATCCATGCCA TTCACTGCGA CTTTCTCGAT GCGGGATCGG ACATTATCGA AACAAACACG
TTCAATGCCA ACCCGATCTC CCAGGCTGAC TACCATGCCG AGCACCTGGT AAGGGAACTC
AACGTTGAAG CTGCAAAGCT TGCGCGAAAG GCTGCCGATG CCTTTACAGC TCGCAACCCT
GAAAAACCGC GCTTTGTCGC AGGATCTATC GGGCCGACCA ATAAAACGCT CTCCCTCTCG
CCGGACGTCA ACAATCCGGG ATACCGCGCC GTAACCTTCA GAAATGTTGT CGATAACTAT
ATCATGCAGC TTGAAGGACT GATGGAGGGC GGCGTTGACC TGCTGCTTGT CGAGACGGTC
TTTGATACCC TGAACTGCAA GGCTGCGCTT TTTGCCATAG AGGAGTTTTT CAACCGGATC
GGAAAACATA TTCCGGTCAT GGTTTCGGGA ACCGTTGTTG ACGCGAGCGG CCGCACCCTG
TCAGGCCAGA CCACCGAAGC CTTCTGGATA TCCATTGCCC ATATGCCTGA TCTGCTCTCC
GTCGGGCTCA ACTGCGCCCT CGGATCAAAA CAGATGCGGC CGTTTATCGA GTCGCTCTCC
GGCATTGCAG AGAGCTATGT GAGCGTGTAT CCCAATGCAG GCCTGCCGAA CGAGTTTGGC
GAATATGATG ACTCCCCGGC CTATATGGCG GAGCAGATCG CCGGTTTTGC AACCTCCGGA
TTTGTCAATA TTGTTGGCGG CTGCTGCGGC ACCACTCCAC AGCATATCGA AGCCATTGCC
GAAGCCGTTC AGGCGCTCGA ACCCCGCAAG CGCCCTCATA GAGAGCACGA GTTGAAGCTT
TCCGGGCTTG AACCGCTCGT CGTCAACAGC ACGACAGGAT TCATCAATGT GGGCGAACGC
ACCAACGTGA CCGGATCGAA AAAATTTGCA CGCCTGGTCA AGGAAGGTAA CTACGATGAA
GCGCTCTCCA TCGCCCGTCA GCAGGTTGAG AGCGGCGCCC AGGTCATCGA CGTCAATGTT
GATGAAGGGA TGCTCGATTC CGAAAAAGTG ATGCGGGAGT TCCTTAACCT GATCGGTTCC
GAACCTGAAA TCTCAAGGGT TCCGATCATG ATCGACAGTT CGAAATGGTC GGTGATCGAA
AACGGATTGC AGTGTGTTCA GGGAAAAAGC ATCGTCAACT CCATCAGCCT CAAAGAGGGC
GAGGATCTCT TCAGGGAACG GGCGCAAAAA GTTCTGCAGT ACGGTGCTGC CGCCATTGTG
ATGGCGTTCG ACGAACAGGG ACAGGCCGAC AGCTACGCCA GACGTATCGA AATATGCAAA
CGCGCCTATG ACCTGCTTAC CATGGAGGTG GGTTTTCCGC CCGAGGATAT TATTTTCGAC
CCCAATGTAC TCACCGTTGC CACCGGCATC GATGAACACA ACAACTATGC CGTTGATTTT
ATCGAAACGG TTCGATGGAT CAAGGAGAAC CTGCCTTACG CAAAGGTTTC GGGTGGCATA
AGCAACGTCT CGTTCTCGTT CCGTGGCAAC GAACCGGTCA GGGAGGCCAT GCATGCCGCA
TTCCTCTATC ATGCCATTCG TGCCGGACTC GATATGGGCA TCGTCAACGC CGGTCAGCTT
GCGATCTACG AAGATATCGA CCCGGAGTTG CTTGAGCGGG TTGAGGACGT GCTGCTTAAC
CGCCGTCCCG ACGCTACCGA AAGACTGGTG AGCTTTGCCG AAACCATCCA GGGCGATGGA
GAAAAAACAG AAGCCAAAGC TGCCGAATGG AGAAGCTTTC CCGTTGAGGA ACGGCTGCGC
CACGCGCTCA TCAAGGGCAT TGTGGAATAT ATCGAAGAGG ACACCGAAGA GGCCCGACTG
CTCTACCCCA GTCCACTGCA GGTCATCGAA GGCCCGCTGA TGAACGGCAT GAACGCAATC
GGCGACCTCT TTGCCGTTGG CAAAATGTTT CTGCCGCAGG TGGTTAAAAG CGCCCGGGTC
ATGAAACGCT CGGTCGCCTG CCTCATTCCG TGGATTGAAA AAGAGAAGGC TGCCAACAAG
GATACCCGAG CTGCTGCCAA GGTGCTGCTC GCAACCGTCA AGGGCGATGT GCACGACATC
GGCAAAAACA TTGTGGCCGT CGTGCTGGCC TGCAACAATT ACGATGTTGT CGATATCGGA
GTTATGATGC CCTGCGAAAA GATTCTTGAA GCAGCAGAAC GAGAAAAAGC CGATCTGATC
GGCCTGAGCG GACTCATCAC CCCTTCGCTT GACGAAATGG TGCATGTCGC CCGCGAAATG
GAACGACTCG GCATGACGAT CCCGCTCCTC ATCGGAGGGG CCACCACATC AAGAATCCAT
ACCGCGGTCA AAATCGCGCC GGTCTACTCC GGGCCGGTCA TCCAGGTGCT CGATGCATCC
CGAAGCGTTC CTGTGGTCAG CAGCCTCCTC AACCCGGCTC TGAGCGAAAC CTACATCGGA
CAACTGAAAA AAGAACAGGC AGAACTGCGC GAAGGCCATG CCGCACGCGC TGCCGGCAAC
AAATACCTCT CTCTTCCCGA TGCCCGCAAG AACCGCGCAA AACTGCAATG GGACGACACC
ACCGTCTACA ATCCGCTTAA ACCCGGCATT ACCCTTATCG AAGATGCGAC CGTTGAAGCG
CTGCGACCCT ATATCGACTG GACGCCGCTC TTTCTCACCT GGGAACTGCA CGGCCGCTAC
CCGCAGATTT TCGACCACAA GGAGTACGGC AATGAAGCGA AAAAACTGTT TGACGACGCA
AACAAACTGC TTGACCGAAT TGAAAAAGAG AAACTGCTCG GACTCAGGGG AGTTGCCGGT
ATTTTCCCTG CCAGCAGTAA CGGCGATGAT ATTGATGTCT TTACCGACGA GAGCCGTTCA
ACTGTTCTGA CAACCTTCCA CACCCTTCGG CAACAGCAGG AAAAGAAGGC AGGAGAACCT
AATCTGGCGC TTGCAGACTT TATCGCCCCC GAAAAATCAG GCATAAAGGA TTATATCGGC
TGTTTTGCCG TCACGGCGGG CCTTGGTATC GAACGAACGC TCAAACAGTT CAGCGAGGAG
CAGGACGACT ACCACCGCAT CATGACGCAG GCACTTGCAG ACCGCCTTGC CGAGGCATTT
GCCGAAATGT TGCACGAAAA GGTGCGCAAA GAGCTCTGGG GTTACGCTCC GGACAGATGC
GTCAAAAACA ATATCCCGTG CGCATGTCAT CCCGTACCTG CCGGCAAGAC CGAACATGAG
GCCCTCGGTA TCGAAGCGCT GCTTGCAGAA AAATATCAGG GCATCCGCCC CGCTTCGGGC
TATCCGGCCT GCCCCGACCA TACCGAAAAA GCTGAGCTCT TCACCCTTCT GAACGCCGAA
ACCAGCACGG GCATCACGCT CACCGAAACC TTTGCCATGA ATCCGGCAGC CTCGGTCAGC
GGGCTCTATT TCGCACACCC TGCCGCAAAG TACTTTGTGC TCGGCAAAAT AGGACGGGAT
CAGGTTGAGG ACTATGCAGT ACGAAAAGGA ATGAGCGTTG AACAAGCAGA AAGGTGGCTG
GCCCCGGCCT TGAACTACGA TCCCGAATAA
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| Protein sequence | MKNSLINLLE TRILVLDGAM GTMIQRHKLQ EEDYRGTRFA SHSHPLIGNN DMLVLTQPDI
IHAIHCDFLD AGSDIIETNT FNANPISQAD YHAEHLVREL NVEAAKLARK AADAFTARNP
EKPRFVAGSI GPTNKTLSLS PDVNNPGYRA VTFRNVVDNY IMQLEGLMEG GVDLLLVETV
FDTLNCKAAL FAIEEFFNRI GKHIPVMVSG TVVDASGRTL SGQTTEAFWI SIAHMPDLLS
VGLNCALGSK QMRPFIESLS GIAESYVSVY PNAGLPNEFG EYDDSPAYMA EQIAGFATSG
FVNIVGGCCG TTPQHIEAIA EAVQALEPRK RPHREHELKL SGLEPLVVNS TTGFINVGER
TNVTGSKKFA RLVKEGNYDE ALSIARQQVE SGAQVIDVNV DEGMLDSEKV MREFLNLIGS
EPEISRVPIM IDSSKWSVIE NGLQCVQGKS IVNSISLKEG EDLFRERAQK VLQYGAAAIV
MAFDEQGQAD SYARRIEICK RAYDLLTMEV GFPPEDIIFD PNVLTVATGI DEHNNYAVDF
IETVRWIKEN LPYAKVSGGI SNVSFSFRGN EPVREAMHAA FLYHAIRAGL DMGIVNAGQL
AIYEDIDPEL LERVEDVLLN RRPDATERLV SFAETIQGDG EKTEAKAAEW RSFPVEERLR
HALIKGIVEY IEEDTEEARL LYPSPLQVIE GPLMNGMNAI GDLFAVGKMF LPQVVKSARV
MKRSVACLIP WIEKEKAANK DTRAAAKVLL ATVKGDVHDI GKNIVAVVLA CNNYDVVDIG
VMMPCEKILE AAEREKADLI GLSGLITPSL DEMVHVAREM ERLGMTIPLL IGGATTSRIH
TAVKIAPVYS GPVIQVLDAS RSVPVVSSLL NPALSETYIG QLKKEQAELR EGHAARAAGN
KYLSLPDARK NRAKLQWDDT TVYNPLKPGI TLIEDATVEA LRPYIDWTPL FLTWELHGRY
PQIFDHKEYG NEAKKLFDDA NKLLDRIEKE KLLGLRGVAG IFPASSNGDD IDVFTDESRS
TVLTTFHTLR QQQEKKAGEP NLALADFIAP EKSGIKDYIG CFAVTAGLGI ERTLKQFSEE
QDDYHRIMTQ ALADRLAEAF AEMLHEKVRK ELWGYAPDRC VKNNIPCACH PVPAGKTEHE
ALGIEALLAE KYQGIRPASG YPACPDHTEK AELFTLLNAE TSTGITLTET FAMNPAASVS
GLYFAHPAAK YFVLGKIGRD QVEDYAVRKG MSVEQAERWL APALNYDPE
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