Gene Cpha266_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2079 
Symbol 
ID4570426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2413654 
End bp2414397 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content55% 
IMG OID639766660 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_912515 
Protein GI119357871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAG TTATTCTTAT TCCGGCCAGG CTTGATTCCA GTCGGCTTGA AAAAAAAATG 
CTCGCTGATC TTCAGGGCGA GCCGCTCATT GTCCGCACCT GGCGTCAGGC GCTGAAATCC
CGTCTGGCCG ACAGGGTCGT TGTTGCTACC GACAACGATG AAATCGCCTC GGTGCTGCAG
GCATACGGAG CGGAGGTGGT GATGACCTCC CCGCATGCGC GGTGCGGAAC AGAGAGGATT
GCAGAAGCGG CAAAAAGCAT TGAGGGAGAT ATCTATGTCA ACCTGCAGGG CGACGAGCCC
CTCATCAGTC CGGAGAACAT CGATCTTGCA CTGGAGCCGT TTTTCACCGA GACCCCTCCC
GATTGCTCGA CGCTTGTCTT TCCCTTGCTC CCCGAAGATT TCCGGCAACT GGAAGATATC
AACACCGTCA AGGTTGTGAT GGATAATGCG GGATACGCCC TCTATTTTTC GCGCAGCCCG
ATACCCTATC AGCGGCAGAT CAGTACGAGC ACCGAGTGTT ATCGCCATAT CGGCCTCTAT
GCGTTCAGGG CCGATGTCCT TCATGCTTTT GCATCCCTTG CTCCTTCCAT GCTCGAACTT
GCCGAATCGC TTGAGCAACT CCGTCTTCTC GAAAACGGCT ACCGGATCCG GTGCGTGAAA
ACCACCAGGG ACGCGCCGGG AGTCAATACG TATGAAGACC TTGAGCTTGT GCGTCAACTG
CTCAGGAACG CACCGGTTCA GTAA
 
Protein sequence
MKAVILIPAR LDSSRLEKKM LADLQGEPLI VRTWRQALKS RLADRVVVAT DNDEIASVLQ 
AYGAEVVMTS PHARCGTERI AEAAKSIEGD IYVNLQGDEP LISPENIDLA LEPFFTETPP
DCSTLVFPLL PEDFRQLEDI NTVKVVMDNA GYALYFSRSP IPYQRQISTS TECYRHIGLY
AFRADVLHAF ASLAPSMLEL AESLEQLRLL ENGYRIRCVK TTRDAPGVNT YEDLELVRQL
LRNAPVQ