Gene Cpha266_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2078 
SymbolxseA 
ID4570425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2412468 
End bp2413676 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content57% 
IMG OID639766659 
Productexodeoxyribonuclease VII large subunit 
Protein accessionYP_912514 
Protein GI119357870 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAG CGATTCTTTC GGTCAGCGAA CTGACCCGAC ACATTAAAAA CGAGCTTGAG 
AGTCTTTTTC CCCGGGTGTC GGTTCGGGGT GAAATATCCA ATTGCAAACG GCACAACTCG
GGCCACATCT ATCTGACGCT GAAAGATGAG GGTGCCCAGA TACCGGCCGT TATCTGGAAA
CACCTTGCCG GTCGGCTTGC CGCAGATCTC AGGGACGGAC AGACTGTCGT AGCGGAAGGG
CGTCTGGAAG TTTACCCTCC TTCCGGTCGC TATCAGCTTA TCTGCACCTC GGTGACCGAT
GCCGGAGAGG GCGCGCTGCA GCAGGCGTTT GCCCTGCTTT TGCAGAAACT CTCCAAAGCG
GGGTATTTCA GCGCCGAACG AAAAAGAGCG ATGCCGAAAA TCCCCAAAAC CATCGGCATC
ATCACCTCGC CGACCGGAGC CGTTATCGAG GATATGGGCA ACACCTTTCA TCGCCGCTTC
CCTGCGGTTT CGCTCCGCCT CTTCCCGGTA AGGGTTCAGG GAACGGAGGC CGCCGAAGAG
ATCTGCTCGG CTATCCGCTA TTTCAACAAT ATCAGAGAAC CGGATCTCCG GCCCGACCTG
CTTATCGTGG CAAGAGGGGG CGGGTCAATG GAGGATCTCC AGCCGTTCAA CGAGGAGATT
GTGGCCGATG CCATCTACAA CTCTCATATT CCCGTCATCA GTGCGGTAGG GCATGAGACC
GATATCACCA TTGCCGATAT GGTGGCCGAT CTGCGGGCCG GAACGCCCTC TATTGCAGCC
GAACTCGCGG TGCCTGACAG GAGCGAACTG CTGCGGATGA TTGAGAACCT TCAAAACAGG
CAGGGAACGC TTCTGCAGGC AAAACTTGCC GGCGCGGAGC TGGAAATTGA CTCGTTGCGC
AACAGTTATG CATTCAACCG TCCGCTCCTG CACATGAAGC AGTGCGACGA TCTGCTGGCG
AATCTTGAGC GGCAGATGGA GCAGTCGGTA CGAACAGGCT ATCTGCAAAC CGCGCAGCGC
TACCTTTCCG CCCGCCAGCA TCTCTCGCTG CTTGATTACA GAAAAACACT TGCGAGAGGG
TATGCGCTCG TAAAAAAAGA GGGGGCTGTC GTTACCAGCG CACAGTGCCT GCATCTTCAG
GATCGCACGG AGCTGCTGTT TCATGACGGG AGCGTAACCG CGGTTGTTAC TGAACCGGTG
CGTTCCTGA
 
Protein sequence
MSTAILSVSE LTRHIKNELE SLFPRVSVRG EISNCKRHNS GHIYLTLKDE GAQIPAVIWK 
HLAGRLAADL RDGQTVVAEG RLEVYPPSGR YQLICTSVTD AGEGALQQAF ALLLQKLSKA
GYFSAERKRA MPKIPKTIGI ITSPTGAVIE DMGNTFHRRF PAVSLRLFPV RVQGTEAAEE
ICSAIRYFNN IREPDLRPDL LIVARGGGSM EDLQPFNEEI VADAIYNSHI PVISAVGHET
DITIADMVAD LRAGTPSIAA ELAVPDRSEL LRMIENLQNR QGTLLQAKLA GAELEIDSLR
NSYAFNRPLL HMKQCDDLLA NLERQMEQSV RTGYLQTAQR YLSARQHLSL LDYRKTLARG
YALVKKEGAV VTSAQCLHLQ DRTELLFHDG SVTAVVTEPV RS