Gene Cpha266_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2046 
Symbol 
ID4568730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2367139 
End bp2369097 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content34% 
IMG OID639766627 
ProductCRISPR-associated RAMP Csm5 family protein 
Protein accessionYP_912482 
Protein GI119357838 
COG category 
COG ID 
TIGRFAM ID[TIGR01899] CRISPR-associated RAMP protein, Csm5 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTA AAATCATCGA GCTGGAAACC CTTACCTCTC TATTTATTAA GGGTAAAGAA 
GAAAATTATG GCGAAGGATT TATCAGGATC GGGAATACTC TTTATTTTAT TGATAACGAT
AATCTATGCG AATTCATTTA TAAAAATACC TACGATAAAG ACGGGAGTAG AATTCCTAAC
AGACCCGATT ATGTTGAATG GTATAGTTAT TTTATTTCAC GCCAGAGAGG TGATGATATA
GTTACACACT ATAAAGGATT TGCAAAAGTA TTTGGTTTAG ATGATGTAAA TAATGAAAGA
GATATCCCTG AGGGATATAA GGAAAAATCT ATCCAATTCT TCTTATCAAA AACTCGTCTT
CTTCAAGGAA ATAACGATAC TCAAAAACAG GTATTGACTG AATATAAAAT TGGAAAAGGG
ATTACTCTGT TAGAAGCGAG CACTCGAAAT GGAAACAGAT TTATACAAAA CGGTAACAAA
AGGCACTATG TTCCTGGTAG TTCTTTAAAG GGTGCAATAC GAAATGCTGT TTTATGGAAA
ATATTAACTG AATCCTCAAT ACAGGCTTGG TTTCTATTGT TTTTGACGTA TCATTTACCT
GTATCCGATT TTTTGAAAAA GATTGATGAA AATGATTATG AAGAAGGGGA AAAAATTATA
AGCAAAAATG CTGTTTTTCA GAATATGAAT TTAATTAGGA ATGGTCATAT TGACAGAAAA
GAAACTAAGA AATTAAAGAA AAAATACAGC GAGCATCTTT CTGGAATACA AGATGCAACC
AATAGTACGC TTGAATCAAA ATGTTTTACC GGAAAAATAC CATATATACC TATTTCAGAT
TCGGATAAAA TTGATCAAAA GAAATATTTA CAAAGCTATA ACGATAGATG GAATGCTGCT
AATGATACCT TACGGGATTT TTTCAGACTT GTAAAGGTTA GTGATGGAAA TTTTGTAGAT
GATTTTGAAC TAAAAGGAAA AATAGCTAAA GCCGTTTGCA GGGATATTTT TGGAACTCCT
CCAAAAAACA AAACCTACCA AAAGAAATTC GATATAAAAC TTGAATGCGC ACCAAAAACT
GTAAAAGTTC AGTTCAAAAT ATCCATAGAT ACAGAACTTG TAAGAGCCTT TTTCCCGTAT
AGGATTCCAG TTTACCTCCA ATCTGTTAAT GGTTTAATGA ATGTAGTAGA TGAGTTTTAT
AGAGAAGTTG CCAAGTTTGA AGCCTTAAAT TATTACAATG GAGTAATATC TATTCCTGAT
GATTTGAATT CTAACGACAA TAGAAAAGCA AAACTAAAGG TGAATACAGA GGTGGTTTAT
AAATTGTATA ATACAATCTT TGGACTAGAA AAAAACGAGA CTTTATTCCG AACAGGTTGG
GGCGGGGGAT TTATGAGTAA AACACAGTTT TTGCATATGG ATATGACAGA TCGGGTACGT
GTCAGAGATA TGGTCCATTA TAATGGTAGT CCTCTTGCTC CAAAGTCGCG TTGCCTGATT
ATAGAAGGTC AGAATGCAAC GGAACCTCTT GGATGGTGCA AGCTCAGGGT TTTGGGTGAC
ACTAAAGACT TAGCTTTACC AAGCATTGAT GCCGTAAAAA TTAGTACGGA CATTCTAACT
GAGCAACCGC GTCAAAGAGG ACAGCAACGG CAAGAGAACC GACAGAATAA GGAGAGACCT
GTTACTGAAA AGGAAATACA CAAGTCGAAA GCAGAAGCAA AAGCCATCTT AAAGCTGGTT
GAGAAGCAGA CGAATTTAAC AACACAAGTG ACATATATGA AGGGACAAGT AGTTCTTGCA
AAAGTTGATG AATGTAAACC TTTTGAATCA ATAAAAATTA CAATTGGCAA TCAATCTGTG
TGTGTGGTAA GTGGTTTTAT AAAACAAAAG GGTGAAGAAG TAAAAATAAA AATTACTAAA
ATTGAAAATG GTAAAATTTT AGAGGCAAAA CTGCTTTGA
 
Protein sequence
MESKIIELET LTSLFIKGKE ENYGEGFIRI GNTLYFIDND NLCEFIYKNT YDKDGSRIPN 
RPDYVEWYSY FISRQRGDDI VTHYKGFAKV FGLDDVNNER DIPEGYKEKS IQFFLSKTRL
LQGNNDTQKQ VLTEYKIGKG ITLLEASTRN GNRFIQNGNK RHYVPGSSLK GAIRNAVLWK
ILTESSIQAW FLLFLTYHLP VSDFLKKIDE NDYEEGEKII SKNAVFQNMN LIRNGHIDRK
ETKKLKKKYS EHLSGIQDAT NSTLESKCFT GKIPYIPISD SDKIDQKKYL QSYNDRWNAA
NDTLRDFFRL VKVSDGNFVD DFELKGKIAK AVCRDIFGTP PKNKTYQKKF DIKLECAPKT
VKVQFKISID TELVRAFFPY RIPVYLQSVN GLMNVVDEFY REVAKFEALN YYNGVISIPD
DLNSNDNRKA KLKVNTEVVY KLYNTIFGLE KNETLFRTGW GGGFMSKTQF LHMDMTDRVR
VRDMVHYNGS PLAPKSRCLI IEGQNATEPL GWCKLRVLGD TKDLALPSID AVKISTDILT
EQPRQRGQQR QENRQNKERP VTEKEIHKSK AEAKAILKLV EKQTNLTTQV TYMKGQVVLA
KVDECKPFES IKITIGNQSV CVVSGFIKQK GEEVKIKITK IENGKILEAK LL