Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2046 |
Symbol | |
ID | 4568730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2367139 |
End bp | 2369097 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639766627 |
Product | CRISPR-associated RAMP Csm5 family protein |
Protein accession | YP_912482 |
Protein GI | 119357838 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGTA AAATCATCGA GCTGGAAACC CTTACCTCTC TATTTATTAA GGGTAAAGAA GAAAATTATG GCGAAGGATT TATCAGGATC GGGAATACTC TTTATTTTAT TGATAACGAT AATCTATGCG AATTCATTTA TAAAAATACC TACGATAAAG ACGGGAGTAG AATTCCTAAC AGACCCGATT ATGTTGAATG GTATAGTTAT TTTATTTCAC GCCAGAGAGG TGATGATATA GTTACACACT ATAAAGGATT TGCAAAAGTA TTTGGTTTAG ATGATGTAAA TAATGAAAGA GATATCCCTG AGGGATATAA GGAAAAATCT ATCCAATTCT TCTTATCAAA AACTCGTCTT CTTCAAGGAA ATAACGATAC TCAAAAACAG GTATTGACTG AATATAAAAT TGGAAAAGGG ATTACTCTGT TAGAAGCGAG CACTCGAAAT GGAAACAGAT TTATACAAAA CGGTAACAAA AGGCACTATG TTCCTGGTAG TTCTTTAAAG GGTGCAATAC GAAATGCTGT TTTATGGAAA ATATTAACTG AATCCTCAAT ACAGGCTTGG TTTCTATTGT TTTTGACGTA TCATTTACCT GTATCCGATT TTTTGAAAAA GATTGATGAA AATGATTATG AAGAAGGGGA AAAAATTATA AGCAAAAATG CTGTTTTTCA GAATATGAAT TTAATTAGGA ATGGTCATAT TGACAGAAAA GAAACTAAGA AATTAAAGAA AAAATACAGC GAGCATCTTT CTGGAATACA AGATGCAACC AATAGTACGC TTGAATCAAA ATGTTTTACC GGAAAAATAC CATATATACC TATTTCAGAT TCGGATAAAA TTGATCAAAA GAAATATTTA CAAAGCTATA ACGATAGATG GAATGCTGCT AATGATACCT TACGGGATTT TTTCAGACTT GTAAAGGTTA GTGATGGAAA TTTTGTAGAT GATTTTGAAC TAAAAGGAAA AATAGCTAAA GCCGTTTGCA GGGATATTTT TGGAACTCCT CCAAAAAACA AAACCTACCA AAAGAAATTC GATATAAAAC TTGAATGCGC ACCAAAAACT GTAAAAGTTC AGTTCAAAAT ATCCATAGAT ACAGAACTTG TAAGAGCCTT TTTCCCGTAT AGGATTCCAG TTTACCTCCA ATCTGTTAAT GGTTTAATGA ATGTAGTAGA TGAGTTTTAT AGAGAAGTTG CCAAGTTTGA AGCCTTAAAT TATTACAATG GAGTAATATC TATTCCTGAT GATTTGAATT CTAACGACAA TAGAAAAGCA AAACTAAAGG TGAATACAGA GGTGGTTTAT AAATTGTATA ATACAATCTT TGGACTAGAA AAAAACGAGA CTTTATTCCG AACAGGTTGG GGCGGGGGAT TTATGAGTAA AACACAGTTT TTGCATATGG ATATGACAGA TCGGGTACGT GTCAGAGATA TGGTCCATTA TAATGGTAGT CCTCTTGCTC CAAAGTCGCG TTGCCTGATT ATAGAAGGTC AGAATGCAAC GGAACCTCTT GGATGGTGCA AGCTCAGGGT TTTGGGTGAC ACTAAAGACT TAGCTTTACC AAGCATTGAT GCCGTAAAAA TTAGTACGGA CATTCTAACT GAGCAACCGC GTCAAAGAGG ACAGCAACGG CAAGAGAACC GACAGAATAA GGAGAGACCT GTTACTGAAA AGGAAATACA CAAGTCGAAA GCAGAAGCAA AAGCCATCTT AAAGCTGGTT GAGAAGCAGA CGAATTTAAC AACACAAGTG ACATATATGA AGGGACAAGT AGTTCTTGCA AAAGTTGATG AATGTAAACC TTTTGAATCA ATAAAAATTA CAATTGGCAA TCAATCTGTG TGTGTGGTAA GTGGTTTTAT AAAACAAAAG GGTGAAGAAG TAAAAATAAA AATTACTAAA ATTGAAAATG GTAAAATTTT AGAGGCAAAA CTGCTTTGA
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Protein sequence | MESKIIELET LTSLFIKGKE ENYGEGFIRI GNTLYFIDND NLCEFIYKNT YDKDGSRIPN RPDYVEWYSY FISRQRGDDI VTHYKGFAKV FGLDDVNNER DIPEGYKEKS IQFFLSKTRL LQGNNDTQKQ VLTEYKIGKG ITLLEASTRN GNRFIQNGNK RHYVPGSSLK GAIRNAVLWK ILTESSIQAW FLLFLTYHLP VSDFLKKIDE NDYEEGEKII SKNAVFQNMN LIRNGHIDRK ETKKLKKKYS EHLSGIQDAT NSTLESKCFT GKIPYIPISD SDKIDQKKYL QSYNDRWNAA NDTLRDFFRL VKVSDGNFVD DFELKGKIAK AVCRDIFGTP PKNKTYQKKF DIKLECAPKT VKVQFKISID TELVRAFFPY RIPVYLQSVN GLMNVVDEFY REVAKFEALN YYNGVISIPD DLNSNDNRKA KLKVNTEVVY KLYNTIFGLE KNETLFRTGW GGGFMSKTQF LHMDMTDRVR VRDMVHYNGS PLAPKSRCLI IEGQNATEPL GWCKLRVLGD TKDLALPSID AVKISTDILT EQPRQRGQQR QENRQNKERP VTEKEIHKSK AEAKAILKLV EKQTNLTTQV TYMKGQVVLA KVDECKPFES IKITIGNQSV CVVSGFIKQK GEEVKIKITK IENGKILEAK LL
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