Gene Cpha266_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2030 
Symbol 
ID4569150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2347987 
End bp2348670 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content50% 
IMG OID639766611 
ProductATP-dependent Clp protease proteolytic subunit ClpP 
Protein accessionYP_912466 
Protein GI119357822 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0162468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA TCAACTTCGG TTTTGAGCAT CATGCACGCA AACTCTATTC AGGCGCCATA 
GAGCAGGGAA TCACCGGTTC GCTTGTGCCT ATGGTTATTG AAACATCGGG TCGCGGCGAA
CGCGCTTTCG ATATTTTTTC GAGATTGCTC AGAGAGCGGA TTATTTTTCT TGGCAGCGGC
ATCGATGAGC ATGTTGCCGG CCTTATTATG GCGCAGCTTA TTTTTCTTGA GTCGGAAGAT
CCTGAGCGCG ATATCTATAT TTATGTCAAC TCTCCAGGCG GCAGCGTGTC GGCGGGTCTG
GGAATTTATG ATACCATGCA GTATATCCGT CCGGATGTTT CGACGGTCTG CGTAGGCATG
GCTGCAAGCA TGGGCGCTTT TCTGCTCGCC AGCGGAACAA AGGGTAAACG GGCTTCGCTG
CCTCATTCAA GAATCATGAT TCATCAGCCG TCCGGCGGGG CTCAGGGACA GGAGAGCGAT
ATCATTATCC AGGCGCGTGA AATAGAAAAG ATCAGGAGGC TTCTTGAAGA GATTCTTGCC
AGTCATACCG GCAAGGATGT TCAGCAGGTC AGGGAGGATT CCGAAAGAGA TCGCTGGATG
AATGCCCAGG AGGCGCTTGA GTACGGCATT ATCGATCAGA TATTTGAAAA ACGTCCGAAA
CCGGATAAGG AAAAGGAGTC CTGA
 
Protein sequence
MANINFGFEH HARKLYSGAI EQGITGSLVP MVIETSGRGE RAFDIFSRLL RERIIFLGSG 
IDEHVAGLIM AQLIFLESED PERDIYIYVN SPGGSVSAGL GIYDTMQYIR PDVSTVCVGM
AASMGAFLLA SGTKGKRASL PHSRIMIHQP SGGAQGQESD IIIQAREIEK IRRLLEEILA
SHTGKDVQQV REDSERDRWM NAQEALEYGI IDQIFEKRPK PDKEKES